C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000003680 Taf6l 10090 - 19:8772522-8786417 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003777 Taf6l-201 8774529-8783999 protein_coding
  ENSMUST00000010249 Taf6l-202 8772522-8774467 protein_coding
  ENSMUST00000176080 Taf6l-006 8774487-8776962 retained_intron
  ENSMUST00000176331 Taf6l-008 8781811-8786265 retained_intron
  ENSMUST00000176496 Taf6l-002 8774496-8786417 protein_coding
  ENSMUST00000176610 Taf6l-001 8774354-8786316 protein_coding
  ENSMUST00000176688 Taf6l-003 8777915-8786281 retained_intron
  ENSMUST00000176719 Taf6l-010 8778551-8782323 processed_transcript
  ENSMUST00000176747 Taf6l-011 8775437-8779050 retained_intron
  ENSMUST00000176991 Taf6l-009 8778577-8782677 retained_intron
  ENSMUST00000177056 Taf6l-005 8774494-8786316 protein_coding
  ENSMUST00000177216 Taf6l-004 8774492-8786257 protein_coding
  ENSMUST00000189739 Taf6l-203 8774529-8783999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003777ENSMUST00000010249ENSMUST00000176080ENSMUST00000176496ENSMUST00000176610ENSMUST00000177056
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003777 2.959±0.00 N/A N/A 3.364±0.63 N/A N/A 1.713±0.00 3.993±0.40 3.341±1.29 3.482±0.00 0.770±0.00 6.245±0.77 5.600±2.14 4.860±0.63
ENSMUST00000010249 33.897±1.44 78.815±11.62 23.954±3.97 10.859±2.03 49.977±4.78 42.271±11.18 15.092±2.59 39.731±2.94 42.171±7.55 49.548±12.71 2.833±0.80 48.459±15.25 27.769±12.68 13.405±0.56
ENSMUST00000176080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.092±0.00
ENSMUST00000176496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.794±0.00
ENSMUST00000176610 3.255±0.75 N/A 2.040±0.00 3.592±0.76 4.936±0.00 N/A 1.321±0.21 3.122±0.35 4.582±1.52 2.516±0.00 1.247±0.48 4.221±0.45 3.638±1.01 4.027±1.43
ENSMUST00000177056 N/A N/A N/A 2.213±0.00 N/A N/A N/A N/A N/A N/A N/A 3.802±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003713 IEA transcription coactivator activity
GO:0004402 IEA histone acetyltransferase activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006352 IEA DNA-templated transcription, initiation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030914 IEA STAGA complex
GO:0043966 IEA histone H3 acetylation
GO:0046982 IEA protein heterodimerization activity
GO:0051090 IEA regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079684 taf6l TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor protein_coding Danio_rerio
ENSG00000162227 TAF6L TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa protein_coding Homo_sapiens

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