C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synovial apoptosis inhibitor 1, synoviolin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162298 SYVN1 9606 - 11:65121780-65134533 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294256 SYVN1-002 65127279-65134532 protein_coding
  ENST00000307289 SYVN1-011 65127281-65134480 protein_coding
  ENST00000377190 SYVN1-001 65127279-65134533 protein_coding
  ENST00000449943 SYVN1-003 65127281-65134487 retained_intron
  ENST00000525874 SYVN1-008 65132627-65133327 retained_intron
  ENST00000526060 SYVN1-004 65127282-65134429 protein_coding
  ENST00000526121 SYVN1-014 65130728-65132341 processed_transcript
  ENST00000527142 SYVN1-009 65131132-65133616 nonsense_mediated_decay
  ENST00000527765 SYVN1-010 65128672-65130289 processed_transcript
  ENST00000528487 SYVN1-005 65131274-65134500 protein_coding
  ENST00000529207 SYVN1-006 65131132-65133324 retained_intron
  ENST00000530451 SYVN1-012 65121780-65129986 retained_intron
  ENST00000531018 SYVN1-007 65130971-65133320 protein_coding
  ENST00000532771 SYVN1-015 65130995-65133548 nonsense_mediated_decay
  ENST00000533685 SYVN1-013 65132695-65133320 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000377190
Transcript ID Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000377190 30.734±0.00 1.849±0.00 8.063±0.00 17.424±0.00 7.272±0.00 11.605±7.49 28.280±0.00 16.124±0.00 18.889±0.00 24.323±0.00 13.185±2.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MM CIL_0002MM_0001 CGP 11:65121780-65134533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IEA in utero embryonic development
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016881 IDA acid-amino acid ligase activity
GO:0018279 IMP protein N-linked glycosylation via asparagine
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding
GO:1902236 IEA negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017842 syvn1 synovial apoptosis inhibitor 1, synoviolin protein_coding Danio_rerio
ENSMUSG00000024807 Syvn1 synovial apoptosis inhibitor 1, synoviolin protein_coding Mus_musculus

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