C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synovial apoptosis inhibitor 1, synoviolin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307289 SYVN1-011 ENSG00000162298 9606 - 11:65127281-65134480 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002MM CIL_0002MM_0001 CGP 11:65121780-65134533

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006987 TAS activation of signaling protein activity involved in unfolded protein response
GO:0008270 IEA zinc ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016881 IDA acid-amino acid ligase activity
GO:0018279 IMP protein N-linked glycosylation via asparagine
GO:0030433 IDA ER-associated ubiquitin-dependent protein catabolic process
GO:0030968 TAS endoplasmic reticulum unfolded protein response
GO:0044267 TAS cellular protein metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025723 Syvn1-004 protein_coding Mus_musculus 0 2547
ENSMUST00000134667 Syvn1-002 protein_coding Mus_musculus 0 1938
ENSMUST00000138532 Syvn1-001 protein_coding Mus_musculus 0 1938
ENSMUST00000156550 Syvn1-005 protein_coding Mus_musculus 0 1882
ENSMUST00000144328 Syvn1-007 retained_intron Mus_musculus 0 610
ENSMUST00000142101 Syvn1-003 retained_intron Mus_musculus 0 610
ENSMUST00000129081 Syvn1-006 protein_coding Mus_musculus 0 579
ENSDART00000111860 syvn1-201 protein_coding Danio_rerio 0 416
ENSDART00000143454 syvn1-001 protein_coding Danio_rerio 0 416
ENSMUST00000007482 Mrpl49-201 protein_coding Mus_musculus 2e-28 132

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