C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein N, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162430 SEPN1 9606 + 1:25800176-25818224 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354177 SEPN1-201 25800176-25818219 protein_coding
  ENST00000361547 SEPN1-001 25800176-25818224 protein_coding
  ENST00000374315 SEPN1-002 25800193-25818221 protein_coding
  ENST00000494537 SEPN1-003 25812728-25815990 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354177ENST00000361547ENST00000374315ENST00000494537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.216±0.00 N/A N/A N/A
ENST00000361547 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.701±0.00 N/A N/A N/A N/A
ENST00000374315 89.583±0.00 83.862±0.00 3.057±0.00 13.206±9.99 20.881±15.96 13.130±11.18 16.291±14.17 22.226±20.04 7.298±4.22 30.606±0.00 21.546±0.00 31.811±19.36 36.444±11.82 24.597±0.00
ENST00000494537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 40.813±0.00 27.065±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033616 sepn1 selenoprotein N, 1 protein_coding Danio_rerio
ENSMUSG00000050989 Sepn1 selenoprotein N, 1 protein_coding Mus_musculus

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