C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein N, 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000050989 Sepn1 10090 - 4:134537892-134552166 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060435 Sepn1-001 134537892-134552166 protein_coding
  ENSMUST00000127585 Sepn1-002 134539579-134541022 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060435
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060435 19.509±4.74 14.906±1.24 13.208±0.58 12.372±6.84 14.731±1.73 4.790±0.33 8.024±0.97 4.105±0.27 2.121±1.57 17.776±2.77 1.001±0.38 19.583±6.85 15.861±12.05 0.360±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HZ CIL_0008HZ_0002 VISTA 4:134170100-134773977

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000033616 sepn1 selenoprotein N, 1 protein_coding Danio_rerio
ENSG00000162430 SEPN1 selenoprotein N, 1 protein_coding Homo_sapiens

Loading