C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: selenoprotein N, 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374315 SEPN1-002 ENSG00000162430 9606 + 1:25800193-25818221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374315 89.583±0.00 83.862±0.00 3.057±0.00 13.206±9.99 20.881±15.96 13.130±11.18 16.291±14.17 22.226±20.04 7.298±4.22 30.606±0.00 21.546±0.00 31.811±19.36 36.444±11.82 24.597±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060435 Sepn1-001 protein_coding Mus_musculus 0 1888
ENSMUST00000127585 Sepn1-002 processed_transcript Mus_musculus 3e-34 152

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