C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribonucleoprotein, PTB-binding 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162437 RAVER2 9606 + 1:64745095-64833232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294428 RAVER2-201 64745095-64833229 protein_coding
  ENST00000371072 RAVER2-001 64745095-64833232 protein_coding
  ENST00000418058 RAVER2-002 64778066-64816509 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleOvaryENST00000371072
Transcript ID Brain Colon Heart Liver Muscle Ovary
ENST00000371072 2.357±0.39 6.064±0.93 4.751±2.06 3.515±0.00 1.354±0.00 3.755±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000268 CIL_000268_0001 CGP 1:64745095-64966504

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075034 raver2 ribonucleoprotein, PTB-binding 2 protein_coding Danio_rerio
ENSMUSG00000035275 Raver2 ribonucleoprotein, PTB-binding 2 protein_coding Mus_musculus

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