C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribonucleoprotein, PTB-binding 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371072 RAVER2-001 ENSG00000162437 9606 + 1:64745095-64833232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleOvaryENST00000371072
Transcript ID Brain Colon Heart Liver Muscle Ovary
ENST00000371072 2.357±0.39 6.064±0.93 4.751±2.06 3.515±0.00 1.354±0.00 3.755±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000268 CIL_000268_0001 CGP 1:64745095-64966504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106955 Raver2-002 protein_coding Mus_musculus 0 1040
ENSMUST00000038463 Raver2-001 protein_coding Mus_musculus 0 1040
ENSMUST00000148148 Raver2-003 processed_transcript Mus_musculus 0 586

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