C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000268_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162437-ENSG00000162434 CGP 9606 1:64745095-64966504
GeneTranscriptPositionBiotype
ENSG00000162434 (JAK1)
Janus kinase 1 		ENST00000342505 (JAK1-001) 64833229-64966504 protein_coding
ENST00000465376 (JAK1-006) 64841474-64848107 processed_transcript
ENST00000467764 (JAK1-003) 64875985-64879063 processed_transcript
ENST00000471473 (JAK1-005) 64844096-64846909 processed_transcript
ENST00000481702 (JAK1-002) 64839496-64841258 processed_transcript
ENST00000494904 (JAK1-004) 64859642-64864856 processed_transcript
ENSG00000233877 (RP11-182I10.2)
 ENST00000446914 (RP11-182I10.2-001) 64941979-64942365 processed_pseudogene
ENSG00000234784 (RP11-182I10.1)
 ENST00000442855 (RP11-182I10.1-001) 64918443-64918683 processed_pseudogene
CIL_000268_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035275-ENSMUSG00000028530 CGP 10090 4:101068983-101265282
GeneTranscriptPositionBiotype
ENSMUSG00000028530 (Jak1)
Janus kinase 1 		ENSMUST00000102781 (Jak1-001) 101152367-101265282 protein_coding
ENSMUST00000125968 (Jak1-004) 101197838-101265226 processed_transcript
ENSMUST00000132292 (Jak1-005) 101181912-101265223 processed_transcript
ENSMUST00000136167 (Jak1-003) 101179591-101185425 processed_transcript
ENSMUST00000147211 (Jak1-002) 101181019-101185450 processed_transcript
ENSMUST00000149297 (Jak1-006) 101191626-101265273 protein_coding
ENSMUST00000151235 (Jak1-008) 101154249-101155119 processed_transcript
ENSMUST00000155328 (Jak1-007) 101181872-101265281 processed_transcript
ENSMUSG00000035275 (Raver2)
ribonucleoprotein, PTB-binding 2 		ENSMUST00000038463 (Raver2-001) 101068983-101152370 protein_coding
ENSMUST00000106955 (Raver2-002) 101068983-101135356 protein_coding
ENSMUST00000148148 (Raver2-003) 101069479-101103806 processed_transcript
ENSMUSG00000077677 (Gm24468)
predicted gene, 24468 		ENSMUST00000104489 (Gm24468-201) 101186764-101186867 snRNA
ENSMUSG00000082928 (Gm12785)
predicted gene 12785 		ENSMUST00000122052 (Gm12785-001) 101210416-101210587 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000268_0001ENSG00000162434ENST00000342505ENST00000465376ENST00000467764ENST00000471473ENST00000481702ENST00000494904ENSG00000233877ENST00000446914ENSG00000234784ENST00000442855CIL_000268_0002ENSMUSG00000028530ENSMUST00000102781ENSMUST00000125968ENSMUST00000132292ENSMUST00000136167ENSMUST00000147211ENSMUST00000149297ENSMUST00000151235ENSMUST00000155328ENSMUSG00000035275ENSMUST00000038463ENSMUST00000106955ENSMUST00000148148ENSMUSG00000077677ENSMUST00000104489ENSMUSG00000082928ENSMUST00000122052
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000268_0001ENSG00000162434ENST00000342505ENSG00000233877ENST00000446914ENSG00000234784ENST00000442855CIL_000268_0002ENSMUSG00000028530ENSMUST00000102781ENSMUST00000149297ENSMUST00000155328ENSMUSG00000035275ENSMUST00000038463ENSMUSG00000077677ENSMUST00000104489ENSMUSG00000082928ENSMUST00000122052
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162434 ENST00000342505 49.588±0.00 26.708±0.00 5.700±0.00 10.164±3.11 19.008±8.78 16.207±9.65 16.615±9.03 19.308±4.81 13.320±6.29 34.351±8.89 19.748±11.79 17.262±8.01 21.246±1.53 27.142±3.22
ENST00000465376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233877 ENST00000446914 N/A 0.075±0.00 0.443±0.00 N/A 0.109±0.06 N/A 1.175±0.00 2.902±0.00 1.233±0.00 N/A 0.804±0.00 0.330±0.00 N/A N/A
ENSG00000234784 ENST00000442855 N/A 0.064±0.00 N/A 0.246±0.18 N/A N/A 0.233±0.00 N/A 1.808±1.75 4.488±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028530 ENSMUST00000102781 41.451±9.65 27.307±2.82 20.853±0.97 16.116±2.14 44.730±8.15 24.934±2.06 19.151±0.61 26.355±0.78 15.858±2.77 38.412±1.20 26.560±5.00 58.481±7.81 21.076±7.14 7.273±0.40
ENSMUST00000125968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149297 N/A 38.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155328 N/A 23.564±3.89 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000035275 ENSMUST00000038463 5.341±0.01 N/A 7.581±0.02 3.680±0.05 N/A N/A N/A N/A N/A 14.085±2.23 N/A N/A N/A N/A
ENSMUST00000106955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000077677 ENSMUST00000104489 N/A N/A 156.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082928 ENSMUST00000122052 N/A N/A N/A N/A N/A 67.638±46.90 N/A N/A 1.588±0.38 N/A N/A N/A 1.521±0.00 N/A

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