C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syncoilin, intermediate filament protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162520 SYNC 9606 - 1:32680360-32703596 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000373484 SYNC-004 32681491-32702756 protein_coding
  ENST00000409190 SYNC-001 32680360-32703119 protein_coding
  ENST00000417633 SYNC-002 32695565-32703596 protein_coding
  ENST00000426909 SYNC-003 32695623-32703079 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000373484ENST00000409190
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000373484 N/A N/A N/A N/A N/A N/A N/A 4.378±0.00 N/A N/A N/A
ENST00000409190 2.181±0.00 2.259±0.00 6.709±0.00 2.874±1.74 6.497±0.00 2.424±0.00 6.763±0.00 N/A 3.188±0.00 2.756±0.00 6.574±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0005882 IEA intermediate filament
GO:0030018 IEA Z disc
GO:0031594 IEA neuromuscular junction
GO:0042383 IEA sarcolemma
GO:0045103 IEA intermediate filament-based process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035944 sync syncoilin, intermediate filament protein protein_coding Danio_rerio
ENSMUSG00000001333 Sync syncoilin protein_coding Mus_musculus

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