C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxin 7-like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162650 ATXN7L2 9606 + 1:109483479-109492804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369869 ATXN7L2-002 109489551-109492804 retained_intron
  ENST00000369870 ATXN7L2-001 109483939-109492734 protein_coding
  ENST00000459635 ATXN7L2-005 109491016-109492734 processed_transcript
  ENST00000463678 ATXN7L2-004 109483479-109492704 nonsense_mediated_decay
  ENST00000497545 ATXN7L2-003 109485546-109492727 retained_intron
  ENST00000604728 ATXN7L2-006 109489340-109490959 processed_transcript
  ENST00000615509 ATXN7L2-201 109483939-109492796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369869ENST00000369870ENST00000459635ENST00000463678ENST00000497545ENST00000604728ENST00000615509
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369869 N/A 1.061±0.00 0.174±0.00 N/A 0.467±0.00 0.125±0.00 N/A N/A 0.215±0.00 0.211±0.03 N/A 0.160±0.00 N/A N/A
ENST00000369870 0.493±0.00 1.696±0.00 N/A 0.854±0.00 0.514±0.00 0.222±0.11 0.314±0.00 0.503±0.48 0.285±0.00 0.403±0.00 0.903±0.00 1.697±0.81 0.554±0.27 5.740±0.20
ENST00000459635 N/A N/A N/A 0.282±0.00 0.449±0.00 0.112±0.00 N/A N/A 0.152±0.00 N/A N/A 2.310±0.00 N/A N/A
ENST00000463678 N/A 0.337±0.00 0.154±0.00 N/A 0.152±0.00 0.148±0.00 0.162±0.00 N/A N/A 0.132±0.01 N/A 0.495±0.46 0.330±0.00 N/A
ENST00000497545 N/A 0.180±0.00 N/A 0.069±0.00 0.080±0.00 N/A N/A 0.225±0.14 N/A N/A N/A 0.100±0.00 0.085±0.01 0.830±0.00
ENST00000604728 0.314±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.708±0.00 N/A N/A N/A
ENST00000615509 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.245±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098X CIL_00098X_0001 VISTA 1:108953074-109556228
CIL_00099A CIL_00099A_0001 VISTA 1:108974252-109576283
CIL_000736 CIL_000736_0003 CGP 1:109466628-109492804
CIL_0006TZ CIL_0006TZ_0002 CGP 1:109483479-109502932

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055300 atxn7l2a ataxin 7-like 2a protein_coding Danio_rerio
ENSDARG00000056268 atxn7l2b ataxin 7-like 2b protein_coding Danio_rerio
ENSMUSG00000048997 Atxn7l2 ataxin 7-like 2 protein_coding Mus_musculus

Loading