C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162931 TRIM17 9606 - 1:228407940-228416861 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295033 TRIM17-002 228408036-228416664 protein_coding
  ENST00000355586 TRIM17-009 228413796-228416627 protein_coding
  ENST00000366697 TRIM17-003 228407940-228416029 protein_coding
  ENST00000366698 TRIM17-001 228408036-228416646 protein_coding
  ENST00000456946 TRIM17-006 228408700-228416757 protein_coding
  ENST00000457345 TRIM17-008 228414900-228416861 protein_coding
  ENST00000479800 TRIM17-004 228409172-228416653 protein_coding
  ENST00000520264 TRIM17-007 228414921-228416652 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295033ENST00000355586ENST00000366697ENST00000366698ENST00000456946ENST00000457345
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295033 0.087±0.00 0.112±0.00 N/A N/A 0.386±0.00 0.016±0.00 0.050±0.00 N/A N/A 0.615±0.00 0.493±0.00 0.547±0.40 0.036±0.02 7.828±2.01
ENST00000355586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.490±0.00 N/A N/A
ENST00000366697 N/A 0.032±0.00 0.364±0.00 N/A 0.111±0.00 N/A N/A 0.084±0.00 0.123±0.00 0.108±0.00 N/A 0.135±0.00 0.047±0.01 N/A
ENST00000366698 N/A N/A N/A 1.059±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 6.376±4.25
ENST00000456946 N/A N/A 0.179±0.00 N/A 0.215±0.00 N/A 0.035±0.00 N/A N/A N/A N/A 0.415±0.52 0.055±0.00 4.182±0.00
ENST00000457345 N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000036964 Trim17 tripartite motif-containing 17 protein_coding Mus_musculus

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