C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036964 Trim17 10090 + 11:58954685-58973098 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047697 Trim17-002 58954685-58973098 protein_coding
  ENSMUST00000075141 Trim17-001 58963802-58973098 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastPlacentaTestisENSMUST00000047697ENSMUST00000075141
Transcript ID Brain Breast Placenta Testis
ENSMUST00000047697 1.116±0.00 0.184±0.00 0.173±0.00 17.724±0.97
ENSMUST00000075141 N/A N/A N/A 71.426±6.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UC CIL_0000UC_000A CGP 11:58948920-58956830

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0051865 IEA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000162931 TRIM17 tripartite motif containing 17 protein_coding Homo_sapiens

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