C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tripartite motif containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366697 TRIM17-003 ENSG00000162931 9606 - 1:228407940-228416029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastKidneyLiverLungOvaryPlacentaENST00000366697
Transcript ID Adrenal Bladder Breast Kidney Liver Lung Ovary Placenta
ENST00000366697 0.032±0.00 0.364±0.00 0.111±0.00 0.084±0.00 0.123±0.00 0.108±0.00 0.135±0.00 0.047±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0046872 IEA metal ion binding
GO:0051865 IDA protein autoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075141 Trim17-001 protein_coding Mus_musculus 0 1053
ENSMUST00000047697 Trim17-002 protein_coding Mus_musculus 0 1042

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