C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dpy-30 homolog (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162961 DPY30 9606 - 2:31867809-32039812 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295066 DPY30-002 32024102-32039805 protein_coding
  ENST00000342166 DPY30-001 32023892-32039812 protein_coding
  ENST00000414013 DPY30-007 32011907-32039793 processed_transcript
  ENST00000422413 DPY30-003 32021020-32039805 processed_transcript
  ENST00000430665 DPY30-006 32020940-32039780 processed_transcript
  ENST00000446765 DPY30-005 31867809-32023757 processed_transcript
  ENST00000452582 DPY30-004 32011886-32039754 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342166ENST00000446765
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342166 13.818±0.00 11.878±0.00 5.599±0.00 15.329±1.16 11.424±5.09 14.829±8.91 6.344±3.91 15.191±6.80 10.394±1.63 17.124±5.66 8.700±0.13 32.647±22.23 34.208±21.23 29.519±5.02
ENST00000446765 N/A N/A 2.477±0.00 4.813±0.00 N/A 1.483±0.00 1.690±0.00 4.848±0.00 2.557±0.00 N/A 4.107±0.00 6.797±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JI CIL_0003JI_0002 CGP 2:31522480-32011230
CIL_0000VB CIL_0000VB_0001 CGP 2:31865060-32039812
CIL_0000VL CIL_0000VL_0001 CGP 2:31867809-32157637

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016197 IMP endosomal transport
GO:0035097 IDA histone methyltransferase complex
GO:0042802 IPI identical protein binding
GO:0042803 IPI protein homodimerization activity
GO:0048188 IDA Set1C/COMPASS complex
GO:0051568 IDA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004427 dpy30 dpy-30 homolog (C. elegans) protein_coding Danio_rerio
ENSMUSG00000024067 Dpy30 dpy-30 homolog (C. elegans) protein_coding Mus_musculus

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