C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003JI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039067-ENSDARG00000010823 CGP 7955 13:35705821-35749289
GeneTranscriptPositionBiotype
ENSDARG00000010823 (memo1)
mediator of cell motility 1 		ENSDART00000016793 (memo1-001) 35732485-35749289 protein_coding
ENSDART00000141748 (memo1-002) 35742566-35748997 retained_intron
CIL_0003JI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000277893-ENSG00000162959 CGP 9606 2:31522480-32011230
GeneTranscriptPositionBiotype
ENSG00000162959 (MEMO1)
mediator of cell motility 1 		ENST00000295065 (MEMO1-001) 31865060-32010557 protein_coding
ENST00000379383 (MEMO1-005) 31867823-31963298 protein_coding
ENST00000404530 (MEMO1-003) 31867823-32010974 protein_coding
ENST00000407893 (MEMO1-009) 31923516-32010498 protein_coding
ENST00000413686 (MEMO1-010) 31892053-32010417 processed_transcript
ENST00000422936 (MEMO1-008) 31869851-31943383 processed_transcript
ENST00000426310 (MEMO1-011) 31867978-32010375 protein_coding
ENST00000437854 (MEMO1-007) 32010187-32011230 protein_coding
ENST00000490459 (MEMO1-002) 31867827-32011036 processed_transcript
ENSG00000223647 (AL133249.1)
 ENST00000416279 (AL133249.1-001) 31793823-31803980 lincRNA
ENSG00000228563 (AL133247.2)
 ENST00000435713 (AL133247.2-001) 31526942-31563464 antisense
ENSG00000237007 (KRT18P52)
keratin 18 pseudogene 52 		ENST00000404956 (KRT18P52-001) 31822591-31823436 processed_pseudogene
ENSG00000242272 (AK2P2)
adenylate kinase 2 pseudogene 2 		ENST00000439142 (AK2P2-001) 31823413-31823817 processed_pseudogene
ENSG00000265267 (AL121652.3)
 ENST00000580521 (AL121652.3-201) 31823018-31823106 miRNA
ENSG00000270422 (AL133247.3)
 ENST00000603236 (AL133247.3-001) 31651381-31651862 processed_pseudogene
ENSG00000273165 (RP11-1057B6.1)
 ENST00000608851 (RP11-1057B6.1-001) 31852976-31853423 lincRNA
ENSG00000277893 (SRD5A2)
steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2) 		ENST00000622030 (SRD5A2-001) 31522480-31581067 protein_coding
CIL_0003JI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038541-ENSMUSG00000058704 CGP 10090 17:74017706-74294883
GeneTranscriptPositionBiotype
ENSMUSG00000038541 (Srd5a2)
steroid 5 alpha-reductase 2 		ENSMUST00000043458 (Srd5a2-201) 74017706-74047916 protein_coding
ENSMUSG00000058704 (Memo1)
mediator of cell motility 1 		ENSMUST00000078459 (Memo1-201) 74200706-74294883 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JI_0001ENSDARG00000010823ENSDART00000016793ENSDART00000141748CIL_0003JI_0002ENSG00000162959ENST00000295065ENST00000379383ENST00000404530ENST00000407893ENST00000413686ENST00000422936ENST00000426310ENST00000437854ENST00000490459ENSG00000223647ENST00000416279ENSG00000228563ENST00000435713ENSG00000237007ENST00000404956ENSG00000242272ENST00000439142ENSG00000265267ENST00000580521ENSG00000270422ENST00000603236ENSG00000273165ENST00000608851ENSG00000277893ENST00000622030CIL_0003JI_0003ENSMUSG00000038541ENSMUST00000043458ENSMUSG00000058704ENSMUST00000078459
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003JI_0001ENSDARG00000010823ENSDART00000016793ENSDART00000141748CIL_0003JI_0002ENSG00000162959ENST00000295065ENST00000404530ENST00000413686ENST00000426310ENST00000490459ENSG00000223647ENST00000416279ENSG00000228563ENST00000435713ENSG00000237007ENST00000404956ENSG00000242272ENST00000439142ENSG00000265267ENST00000580521ENSG00000270422ENST00000603236ENSG00000273165ENST00000608851ENSG00000277893ENST00000622030CIL_0003JI_0003ENSMUSG00000038541ENSMUST00000043458ENSMUSG00000058704ENSMUST00000078459
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010823 ENSDART00000016793 N/A N/A N/A 4.841±2.69 N/A N/A 5.125±2.04 3.722±2.15 0.551±0.00 N/A 4.869±0.00 N/A N/A N/A
ENSDART00000141748 N/A N/A N/A N/A N/A N/A N/A N/A 0.642±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162959 ENST00000295065 0.491±0.00 0.617±0.00 0.267±0.00 0.756±0.00 1.187±0.61 0.680±0.00 N/A 0.932±0.12 0.954±0.00 1.387±0.00 0.654±0.00 0.820±0.01 N/A N/A
ENST00000379383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404530 N/A N/A N/A N/A 2.533±0.00 2.936±0.12 6.581±0.00 N/A 3.105±0.00 N/A 2.141±0.00 5.430±3.30 8.648±0.45 N/A
ENST00000407893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413686 N/A N/A N/A 13.103±0.00 N/A 3.476±0.00 5.104±0.00 N/A 10.714±0.00 N/A 5.459±0.00 10.547±0.00 N/A 25.471±0.00
ENST00000422936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426310 4.530±0.00 6.243±0.00 N/A 3.742±0.00 6.672±0.00 3.417±0.00 4.806±0.00 5.436±0.00 4.568±0.00 6.040±0.00 5.718±0.00 13.283±0.00 7.285±3.81 28.329±10.08
ENST00000437854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.640±0.00 N/A N/A 7.854±0.00
ENSG00000223647 ENST00000416279 0.190±0.00 0.119±0.00 N/A 0.084±0.00 0.080±0.00 N/A N/A N/A 0.035±0.00 N/A N/A 0.097±0.00 N/A 0.135±0.10
ENSG00000228563 ENST00000435713 N/A N/A N/A N/A N/A N/A N/A 1.040±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000237007 ENST00000404956 0.021±0.00 0.072±0.00 N/A N/A 0.143±0.09 N/A N/A 0.059±0.00 0.021±0.00 N/A N/A 0.031±0.01 N/A 0.293±0.00
ENSG00000242272 ENST00000439142 0.046±0.00 0.146±0.00 0.731±0.00 N/A 0.051±0.00 N/A N/A N/A N/A 0.149±0.00 N/A 0.158±0.00 N/A 0.395±0.00
ENSG00000265267 ENST00000580521 N/A 0.273±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270422 ENST00000603236 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A
ENSG00000273165 ENST00000608851 N/A 0.286±0.00 N/A 0.040±0.00 0.602±0.00 3.407±0.00 0.084±0.03 0.203±0.00 0.017±0.00 N/A 0.183±0.00 0.232±0.10 N/A 0.110±0.05
ENSG00000277893 ENST00000622030 N/A 0.008±0.00 0.036±0.00 0.016±0.00 0.025±0.01 0.016±0.00 N/A 5.792±5.72 1.864±1.59 0.376±0.26 0.009±0.00 0.490±0.82 0.012±0.00 1.239±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038541 ENSMUST00000043458 0.149±0.06 431.534±399.86 0.023±0.00 0.070±0.01 N/A 0.785±0.36 0.036±0.00 1.853±0.68 0.556±0.53 N/A 0.082±0.03 0.981±0.44 0.016±0.01 0.394±0.30
ENSMUSG00000058704 ENSMUST00000078459 10.164±3.62 45.622±11.35 17.787±4.40 19.494±9.11 12.952±4.81 17.350±4.74 7.207±0.74 6.968±1.69 22.001±12.79 8.878±1.38 13.757±2.46 16.715±4.58 16.857±1.89 23.976±11.58

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