C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dpy-30 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000342166 DPY30-001 ENSG00000162961 9606 - 2:32023892-32039812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342166
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342166 13.818±0.00 11.878±0.00 5.599±0.00 15.329±1.16 11.424±5.09 14.829±8.91 6.344±3.91 15.191±6.80 10.394±1.63 17.124±5.66 8.700±0.13 32.647±22.23 34.208±21.23 29.519±5.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JI CIL_0003JI_0002 CGP 2:31522480-32011230
CIL_0000VB CIL_0000VB_0001 CGP 2:31865060-32039812
CIL_0000VL CIL_0000VL_0001 CGP 2:31867809-32157637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005794 IDA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016197 IMP endosomal transport
GO:0035097 IDA histone methyltransferase complex
GO:0042802 IPI identical protein binding
GO:0042803 IPI protein homodimerization activity
GO:0048188 IDA Set1C/COMPASS complex
GO:0051568 IDA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112571 Dpy30-201 protein_coding Mus_musculus 0 732
ENSMUST00000164832 Dpy30-202 protein_coding Mus_musculus 0 730

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