C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054251-ENSDARG00000017500 CGP 7955 13:33031021-33122924
GeneTranscriptPositionBiotype
ENSDARG00000017500 (rock2a)
rho-associated, coiled-coil containing protein kinase 2a 		ENSDART00000133882 (rock2a-001) 33038843-33122924 protein_coding
ENSDARG00000054251 (pqlc3)
PQ loop repeat containing 3 		ENSDART00000076410 (pqlc3-201) 33031134-33038653 protein_coding
ENSDART00000085252 (pqlc3-001) 33031021-33036505 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00001X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162976-ENSG00000134318 CGP 9606 2:11155198-11348330
GeneTranscriptPositionBiotype
ENSG00000162976 (PQLC3)
PQ loop repeat containing 3 		ENST00000295083 (PQLC3-001) 11155372-11178874 protein_coding
ENST00000402361 (PQLC3-011) 11155535-11178024 protein_coding
ENST00000428481 (PQLC3-002) 11155609-11178279 protein_coding
ENST00000441908 (PQLC3-201) 11155372-11178870 protein_coding
ENST00000445402 (PQLC3-010) 11155198-11172046 protein_coding
ENST00000445921 (PQLC3-005) 11155431-11177957 nonsense_mediated_decay
ENST00000464700 (PQLC3-008) 11155515-11160819 retained_intron
ENST00000476787 (PQLC3-003) 11155533-11172029 processed_transcript
ENST00000487471 (PQLC3-007) 11172012-11178168 processed_transcript
ENST00000496444 (PQLC3-009) 11160290-11160753 retained_intron
ENSG00000230154 (AC018463.4)
 ENST00000456674 (AC018463.4-001) 11308025-11308941 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001X_0001ENSDARG00000017500ENSDART00000133882ENSDARG00000054251ENSDART00000076410ENSDART00000085252CIL_00001X_0002ENSG00000162976ENST00000295083ENST00000402361ENST00000428481ENST00000441908ENST00000445402ENST00000445921ENST00000464700ENST00000476787ENST00000487471ENST00000496444ENSG00000230154ENST00000456674
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001X_0001ENSDARG00000017500ENSDART00000133882ENSDARG00000054251ENSDART00000076410ENSDART00000085252CIL_00001X_0002ENSG00000162976ENST00000295083ENST00000402361ENST00000428481ENST00000441908ENST00000445402ENST00000445921ENST00000464700ENSG00000230154ENST00000456674
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017500 ENSDART00000133882 N/A N/A N/A 3.748±2.75 N/A N/A 20.723±13.64 4.312±3.69 0.379±0.00 N/A 2.216±0.00 N/A N/A N/A
ENSDARG00000054251 ENSDART00000076410 N/A N/A N/A N/A N/A N/A 3.871±0.60 11.108±0.00 N/A N/A 0.574±0.00 N/A N/A N/A
ENSDART00000085252 N/A N/A N/A 4.079±0.00 N/A N/A 3.359±2.44 5.362±0.02 0.117±0.00 N/A 0.251±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162976 ENST00000295083 8.233±0.00 N/A 0.933±0.00 0.584±0.00 2.346±0.00 1.265±0.01 0.954±0.31 5.634±0.00 1.493±0.04 N/A 0.978±0.94 5.198±3.72 3.383±0.00 1.542±0.00
ENST00000402361 N/A N/A N/A N/A N/A 1.832±0.00 N/A N/A 7.692±0.00 3.101±0.00 0.629±0.00 N/A 1.794±0.00 1.232±0.00
ENST00000428481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.538±0.00 N/A N/A
ENST00000441908 1.805±0.00 6.424±0.00 0.709±0.00 0.685±0.00 6.649±5.52 4.297±3.48 2.098±0.00 4.578±0.00 1.382±0.00 4.454±0.00 0.587±0.00 2.656±1.09 1.877±0.00 6.897±0.00
ENST00000445402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.328±0.00 N/A N/A N/A
ENST00000445921 N/A N/A N/A N/A 1.673±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464700 N/A N/A N/A N/A N/A N/A 2.530±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000476787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230154 ENST00000456674 0.059±0.00 N/A N/A N/A N/A N/A N/A N/A 0.072±0.04 N/A N/A N/A N/A N/A

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