C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 5A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162980 ARL5A 9606 - 2:151788984-151828492 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295087 ARL5A-001 151798802-151828488 protein_coding
  ENST00000428992 ARL5A-002 151803103-151828468 protein_coding
  ENST00000446896 ARL5A-004 151789078-151828441 nonsense_mediated_decay
  ENST00000458140 ARL5A-003 151802982-151828492 nonsense_mediated_decay
  ENST00000487723 ARL5A-007 151827480-151828465 processed_transcript
  ENST00000487818 ARL5A-006 151789635-151792086 processed_transcript
  ENST00000495604 ARL5A-005 151788984-151791790 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295087ENST00000428992ENST00000446896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295087 7.966±0.00 4.595±0.00 1.179±0.00 5.495±0.82 5.079±1.18 4.282±0.81 7.729±2.65 4.706±0.18 5.108±1.67 6.084±3.37 4.273±2.11 4.722±3.19 2.737±0.86 2.186±1.61
ENST00000428992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.720±0.00 17.893±0.00 8.586±0.00
ENST00000446896 N/A N/A N/A N/A N/A N/A N/A 2.305±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RZ CIL_0003RZ_0002 CGP 2:151485336-151828492
CIL_0007E4 CIL_0007E4_0001 CGP 2:151788984-152099079

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006886 IEA intracellular protein transport
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0019001 IEA guanyl nucleotide binding
GO:0031683 IEA G-protein beta/gamma-subunit complex binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018627 arl5a ADP-ribosylation factor-like 5A protein_coding Danio_rerio
ENSMUSG00000036093 Arl5a ADP-ribosylation factor-like 5A protein_coding Mus_musculus

Loading