C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007E4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162980-ENSG00000182389 CGP 9606 2:151788984-152099079
GeneTranscriptPositionBiotype
ENSG00000162980 (ARL5A)
ADP-ribosylation factor-like 5A 		ENST00000295087 (ARL5A-001) 151798802-151828488 protein_coding
ENST00000428992 (ARL5A-002) 151803103-151828468 protein_coding
ENST00000446896 (ARL5A-004) 151789078-151828441 nonsense_mediated_decay
ENST00000458140 (ARL5A-003) 151802982-151828492 nonsense_mediated_decay
ENST00000487723 (ARL5A-007) 151827480-151828465 processed_transcript
ENST00000487818 (ARL5A-006) 151789635-151792086 processed_transcript
ENST00000495604 (ARL5A-005) 151788984-151791790 processed_transcript
ENSG00000182389 (CACNB4)
calcium channel, voltage-dependent, beta 4 subunit 		ENST00000201943 (CACNB4-004) 151839114-152099023 protein_coding
ENST00000360283 (CACNB4-201) 151838927-151973935 protein_coding
ENST00000397327 (CACNB4-002) 151838684-151973940 protein_coding
ENST00000427385 (CACNB4-005) 151838814-152098721 protein_coding
ENST00000434468 (CACNB4-009) 151876480-151971988 protein_coding
ENST00000439467 (CACNB4-006) 151838614-152098461 protein_coding
ENST00000470066 (CACNB4-007) 151865761-151973720 retained_intron
ENST00000475848 (CACNB4-008) 151883297-151973971 processed_transcript
ENST00000534999 (CACNB4-003) 151838626-151973940 protein_coding
ENST00000539935 (CACNB4-001) 151832776-152099079 protein_coding
CIL_0007E4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036093-ENSMUSG00000017412 CGP 10090 2:52397951-52676831
GeneTranscriptPositionBiotype
ENSMUSG00000017412 (Cacnb4)
calcium channel, voltage-dependent, beta 4 subunit 		ENSMUST00000078324 (Cacnb4-002) 52428325-52676831 protein_coding
ENSMUST00000102760 (Cacnb4-001) 52428325-52558560 protein_coding
ENSMUST00000102761 (Cacnb4-003) 52428325-52558567 protein_coding
ENSMUST00000132322 (Cacnb4-004) 52556187-52556709 processed_transcript
ENSMUST00000148837 (Cacnb4-005) 52675727-52676143 processed_transcript
ENSMUST00000178799 (Cacnb4-201) 52428320-52676582 protein_coding
ENSMUSG00000025201 (Bloc1s2-ps)
biogenesis of lysosomal organelles complex-1, subunit 2, pseudogene 		ENSMUST00000183232 (Bloc1s2-ps-001) 52619754-52620185 processed_pseudogene
ENSMUSG00000036093 (Arl5a)
ADP-ribosylation factor-like 5A 		ENSMUST00000036541 (Arl5a-001) 52397951-52424901 protein_coding
ENSMUST00000130357 (Arl5a-002) 52402387-52412315 retained_intron
ENSMUSG00000082132 (Gm13541)
predicted gene 13541 		ENSMUST00000119519 (Gm13541-001) 52551969-52552251 processed_pseudogene
ENSMUSG00000085315 (A430018G15Rik)
RIKEN cDNA A430018G15 gene 		ENSMUST00000124210 (A430018G15Rik-002) 52425012-52431893 processed_transcript
ENSMUST00000143821 (A430018G15Rik-001) 52425012-52434885 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E4_0001ENSG00000162980ENST00000295087ENST00000428992ENST00000446896ENST00000458140ENST00000487723ENST00000487818ENST00000495604ENSG00000182389ENST00000201943ENST00000360283ENST00000397327ENST00000427385ENST00000434468ENST00000439467ENST00000470066ENST00000475848ENST00000534999ENST00000539935CIL_0007E4_0002ENSMUSG00000017412ENSMUST00000078324ENSMUST00000102760ENSMUST00000102761ENSMUST00000132322ENSMUST00000148837ENSMUST00000178799ENSMUSG00000025201ENSMUST00000183232ENSMUSG00000036093ENSMUST00000036541ENSMUST00000130357ENSMUSG00000082132ENSMUST00000119519ENSMUSG00000085315ENSMUST00000124210ENSMUST00000143821
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007E4_0001ENSG00000162980ENST00000295087ENST00000428992ENST00000446896ENSG00000182389ENST00000201943ENST00000427385ENST00000439467ENST00000470066ENST00000475848ENST00000539935CIL_0007E4_0002ENSMUSG00000017412ENSMUST00000078324ENSMUST00000102760ENSMUST00000102761ENSMUST00000148837ENSMUST00000178799ENSMUSG00000025201ENSMUST00000183232ENSMUSG00000036093ENSMUST00000036541ENSMUSG00000082132ENSMUST00000119519ENSMUSG00000085315ENSMUST00000124210ENSMUST00000143821
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000162980 ENST00000295087 7.966±0.00 4.595±0.00 1.179±0.00 5.495±0.82 5.079±1.18 4.282±0.81 7.729±2.65 4.706±0.18 5.108±1.67 6.084±3.37 4.273±2.11 4.722±3.19 2.737±0.86 2.186±1.61
ENST00000428992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.720±0.00 17.893±0.00 8.586±0.00
ENST00000446896 N/A N/A N/A N/A N/A N/A N/A 2.305±0.00 N/A N/A N/A N/A N/A N/A
ENST00000458140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182389 ENST00000201943 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A 0.126±0.00 N/A
ENST00000360283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000427385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A
ENST00000434468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439467 N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A 0.154±0.00 0.080±0.00 N/A
ENST00000470066 0.026±0.00 0.051±0.00 0.207±0.00 N/A 0.118±0.04 N/A 0.018±0.00 N/A 0.019±0.00 0.213±0.14 N/A 0.064±0.00 0.021±0.00 N/A
ENST00000475848 N/A N/A N/A N/A N/A 0.742±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539935 0.026±0.00 N/A N/A 3.611±1.49 0.089±0.00 N/A N/A 0.608±0.00 0.007±0.00 N/A N/A 0.047±0.00 0.030±0.00 0.381±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017412 ENSMUST00000078324 0.056±0.01 N/A N/A N/A N/A N/A N/A 0.318±0.03 0.058±0.00 N/A N/A 0.330±0.00 N/A 0.065±0.01
ENSMUST00000102760 0.198±0.17 0.106±0.04 0.124±0.00 2.745±0.44 0.220±0.11 0.124±0.01 0.077±0.04 0.182±0.00 0.169±0.05 0.198±0.00 N/A 0.094±0.02 0.059±0.04 0.135±0.02
ENSMUST00000102761 0.100±0.00 N/A N/A 1.577±0.45 0.241±0.00 0.121±0.03 N/A N/A 0.046±0.01 N/A 0.073±0.00 0.288±0.15 0.032±0.00 0.098±0.02
ENSMUST00000132322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.635±15.53 N/A N/A
ENSMUST00000178799 0.161±0.09 0.109±0.03 0.328±0.22 1.099±0.55 0.083±0.01 0.077±0.01 N/A 0.420±0.00 0.084±0.03 N/A 0.092±0.03 0.357±0.17 0.061±0.04 N/A
ENSMUSG00000025201 ENSMUST00000183232 0.648±0.00 N/A 0.368±0.29 0.926±0.01 1.151±0.83 0.446±0.23 0.315±0.20 0.190±0.06 0.497±0.26 0.232±0.09 0.236±0.08 0.700±0.47 0.324±0.11 0.542±0.08
ENSMUSG00000036093 ENSMUST00000036541 12.215±1.04 12.158±0.76 14.398±1.55 11.853±4.51 9.141±2.26 14.399±4.08 7.742±0.84 11.362±2.18 18.415±6.74 13.425±0.63 6.944±0.47 12.679±4.66 8.397±2.40 0.868±0.29
ENSMUST00000130357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082132 ENSMUST00000119519 N/A N/A 0.134±0.00 2.511±2.72 N/A N/A N/A 0.614±0.23 0.253±0.00 N/A 0.308±0.05 0.475±0.10 N/A 0.326±0.03
ENSMUSG00000085315 ENSMUST00000124210 N/A N/A N/A N/A N/A 0.272±0.12 N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143821 N/A 0.198±0.07 N/A N/A 0.532±0.17 0.486±0.00 N/A N/A 0.462±0.16 0.240±0.06 0.582±0.37 1.097±0.78 0.176±0.00 0.638±0.09

Loading