C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032630-ENSDARG00000018627 CGP 7955 9:23838483-23951758
GeneTranscriptPositionBiotype
ENSDARG00000018627 (arl5a)
ADP-ribosylation factor-like 5A 		ENSDART00000007392 (arl5a-001) 23936210-23951758 protein_coding
ENSDARG00000032630 (neb)
nebulin 		ENSDART00000101711 (neb-201) 23838708-23867972 protein_coding
ENSDART00000134090 (neb-005) 23845145-23857712 retained_intron
ENSDART00000137045 (neb-003) 23857546-23862091 processed_transcript
ENSDART00000137778 (neb-008) 23839089-23843138 retained_intron
ENSDART00000140686 (neb-004) 23855205-23861789 processed_transcript
ENSDART00000142020 (neb-006) 23845190-23855429 protein_coding
ENSDART00000142585 (neb-002) 23838690-23865181 protein_coding
ENSDART00000143888 (neb-001) 23838483-23926183 protein_coding
ENSDART00000146486 (neb-007) 23845146-23868205 protein_coding
CIL_0003RZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000183091-ENSG00000162980 CGP 9606 2:151485336-151828492
GeneTranscriptPositionBiotype
ENSG00000080345 (RIF1)
replication timing regulatory factor 1 		ENST00000243326 (RIF1-001) 151409941-151482172 protein_coding
ENST00000414861 (RIF1-006) 151409956-151455110 protein_coding
ENST00000428287 (RIF1-004) 151409886-151475388 protein_coding
ENST00000430328 (RIF1-007) 151410090-151475388 protein_coding
ENST00000444746 (RIF1-003) 151409883-151475388 protein_coding
ENST00000453091 (RIF1-002) 151409883-151475622 protein_coding
ENST00000454583 (RIF1-008) 151464700-151508013 nonsense_mediated_decay
ENST00000457745 (RIF1-009) 151486277-151498213 processed_transcript
ENST00000467762 (RIF1-012) 151505948-151507112 processed_transcript
ENST00000484077 (RIF1-010) 151494975-151498215 processed_transcript
ENST00000494333 (RIF1-005) 151409900-151420379 processed_transcript
ENST00000498041 (RIF1-014) 151420225-151423760 processed_transcript
ENSG00000162980 (ARL5A)
ADP-ribosylation factor-like 5A 		ENST00000295087 (ARL5A-001) 151798802-151828488 protein_coding
ENST00000428992 (ARL5A-002) 151803103-151828468 protein_coding
ENST00000446896 (ARL5A-004) 151789078-151828441 nonsense_mediated_decay
ENST00000458140 (ARL5A-003) 151802982-151828492 nonsense_mediated_decay
ENST00000487723 (ARL5A-007) 151827480-151828465 processed_transcript
ENST00000487818 (ARL5A-006) 151789635-151792086 processed_transcript
ENST00000495604 (ARL5A-005) 151788984-151791790 processed_transcript
CIL_0003RZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026950-ENSMUSG00000036093 CGP 10090 2:52136647-52424901
GeneTranscriptPositionBiotype
ENSMUSG00000026950 (Neb)
nebulin 		ENSMUST00000028320 (Neb-002) 52136662-52223737 protein_coding
ENSMUST00000036934 (Neb-201) 52136647-52338798 protein_coding
ENSMUST00000075301 (Neb-001) 52136662-52335134 protein_coding
ENSMUST00000127339 (Neb-011) 52319634-52335762 processed_transcript
ENSMUST00000131236 (Neb-007) 52173559-52176037 processed_transcript
ENSMUST00000135200 (Neb-003) 52137261-52176614 protein_coding
ENSMUST00000136769 (Neb-010) 52328834-52338798 processed_transcript
ENSMUST00000137410 (Neb-006) 52137117-52157912 processed_transcript
ENSMUST00000139672 (Neb-004) 52221782-52256156 protein_coding
ENSMUST00000148356 (Neb-012) 52178046-52192520 protein_coding
ENSMUST00000152851 (Neb-009) 52156341-52163009 processed_transcript
ENSMUSG00000036093 (Arl5a)
ADP-ribosylation factor-like 5A 		ENSMUST00000036541 (Arl5a-001) 52397951-52424901 protein_coding
ENSMUST00000130357 (Arl5a-002) 52402387-52412315 retained_intron
ENSMUSG00000081158 (Gm13521)
predicted gene 13521 		ENSMUST00000118922 (Gm13521-001) 52361630-52362495 processed_pseudogene
ENSMUSG00000086447 (Gm13522)
predicted gene 13522 		ENSMUST00000124622 (Gm13522-001) 52385916-52388260 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RZ_0001ENSDARG00000018627ENSDART00000007392ENSDARG00000032630ENSDART00000101711ENSDART00000134090ENSDART00000137045ENSDART00000137778ENSDART00000140686ENSDART00000142020ENSDART00000142585ENSDART00000143888ENSDART00000146486CIL_0003RZ_0002ENSG00000080345ENST00000243326ENST00000414861ENST00000428287ENST00000430328ENST00000444746ENST00000453091ENST00000454583ENST00000457745ENST00000467762ENST00000484077ENST00000494333ENST00000498041ENSG00000162980ENST00000295087ENST00000428992ENST00000446896ENST00000458140ENST00000487723ENST00000487818ENST00000495604CIL_0003RZ_0003ENSMUSG00000026950ENSMUST00000028320ENSMUST00000036934ENSMUST00000075301ENSMUST00000127339ENSMUST00000131236ENSMUST00000135200ENSMUST00000136769ENSMUST00000137410ENSMUST00000139672ENSMUST00000148356ENSMUST00000152851ENSMUSG00000036093ENSMUST00000036541ENSMUST00000130357ENSMUSG00000081158ENSMUST00000118922ENSMUSG00000086447ENSMUST00000124622
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RZ_0001ENSDARG00000018627ENSDART00000007392ENSDARG00000032630ENSDART00000101711ENSDART00000137778ENSDART00000143888ENSDART00000146486CIL_0003RZ_0002ENSG00000080345ENST00000243326ENST00000428287ENST00000430328ENST00000444746ENST00000453091ENSG00000162980ENST00000295087ENST00000428992ENST00000446896CIL_0003RZ_0003ENSMUSG00000026950ENSMUST00000028320ENSMUST00000036934ENSMUST00000075301ENSMUST00000131236ENSMUST00000135200ENSMUST00000137410ENSMUST00000139672ENSMUST00000148356ENSMUST00000152851ENSMUSG00000036093ENSMUST00000036541ENSMUSG00000081158ENSMUST00000118922ENSMUSG00000086447ENSMUST00000124622
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018627 ENSDART00000007392 N/A N/A N/A 8.326±5.84 N/A N/A 5.987±0.19 5.382±0.00 0.777±0.00 N/A 2.938±0.00 N/A N/A N/A
ENSDARG00000032630 ENSDART00000101711 N/A N/A N/A N/A N/A N/A 0.151±0.06 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137778 N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A 0.377±0.00 N/A N/A N/A N/A N/A
ENSDART00000140686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000143888 N/A N/A N/A 0.117±0.02 N/A N/A 0.022±0.00 0.553±0.37 0.013±0.00 N/A N/A N/A N/A N/A
ENSDART00000146486 N/A N/A N/A 0.738±0.00 N/A N/A N/A N/A 0.312±0.00 N/A 301.657±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000080345 ENST00000243326 1.533±0.00 0.675±0.00 N/A 1.282±0.00 2.164±0.66 1.769±0.67 0.760±0.16 N/A 0.177±0.00 2.929±0.00 N/A 2.465±2.24 0.775±0.00 2.177±1.09
ENST00000414861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428287 N/A N/A N/A N/A N/A N/A N/A 1.198±0.00 N/A 1.981±0.00 N/A N/A N/A N/A
ENST00000430328 N/A N/A N/A N/A N/A N/A N/A N/A 2.988±0.00 N/A N/A N/A N/A N/A
ENST00000444746 N/A N/A N/A 1.176±0.00 N/A 2.186±0.00 0.900±0.00 N/A 3.727±0.00 1.911±0.00 N/A 7.052±0.00 N/A N/A
ENST00000453091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.871±0.00 5.985±0.00
ENST00000454583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162980 ENST00000295087 7.966±0.00 4.595±0.00 1.179±0.00 5.495±0.82 5.079±1.18 4.282±0.81 7.729±2.65 4.706±0.18 5.108±1.67 6.084±3.37 4.273±2.11 4.722±3.19 2.737±0.86 2.186±1.61
ENST00000428992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.720±0.00 17.893±0.00 8.586±0.00
ENST00000446896 N/A N/A N/A N/A N/A N/A N/A 2.305±0.00 N/A N/A N/A N/A N/A N/A
ENST00000458140 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026950 ENSMUST00000028320 0.075±0.03 0.061±0.02 N/A 0.238±0.09 8.571±7.36 0.031±0.00 0.119±0.00 0.165±0.21 0.287±0.18 0.500±0.66 157.648±54.92 0.428±0.21 0.065±0.03 0.068±0.03
ENSMUST00000036934 N/A 0.109±0.00 N/A N/A 2.194±0.73 0.013±0.00 0.029±0.00 0.005±0.00 N/A N/A 29.429±0.00 0.075±0.02 N/A 0.026±0.00
ENSMUST00000075301 0.015±0.00 N/A N/A 0.059±0.00 1.445±1.48 0.010±0.00 0.051±0.02 N/A 0.214±0.00 0.561±0.54 23.855±0.00 0.067±0.02 0.025±0.00 0.038±0.00
ENSMUST00000127339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131236 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000135200 N/A 0.308±0.06 N/A 0.833±0.00 N/A N/A N/A N/A N/A 0.198±0.00 459.760±72.13 1.951±1.02 0.239±0.06 0.234±0.00
ENSMUST00000136769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137410 0.201±0.03 0.554±0.10 N/A 0.121±0.00 0.093±0.02 0.114±0.05 N/A 0.145±0.04 1.377±0.79 0.224±0.04 N/A 0.680±0.15 N/A 0.380±0.08
ENSMUST00000139672 N/A 0.055±0.00 N/A N/A 0.030±0.00 N/A N/A 0.009±0.00 N/A N/A N/A 0.323±0.10 N/A 0.102±0.00
ENSMUST00000148356 N/A N/A N/A N/A 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152851 N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000036093 ENSMUST00000036541 12.215±1.04 12.158±0.76 14.398±1.55 11.853±4.51 9.141±2.26 14.399±4.08 7.742±0.84 11.362±2.18 18.415±6.74 13.425±0.63 6.944±0.47 12.679±4.66 8.397±2.40 0.868±0.29
ENSMUST00000130357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081158 ENSMUST00000118922 N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.21 N/A 0.086±0.07 N/A N/A 0.044±0.00
ENSMUSG00000086447 ENSMUST00000124622 N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A 0.251±0.00 0.134±0.00 N/A 0.143±0.00 N/A 0.110±0.01

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