C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 138
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163006 CCDC138 9606 + 2:108786757-108885477 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295124 CCDC138-001 108786763-108876578 protein_coding
  ENST00000409529 CCDC138-003 108786761-108876576 nonsense_mediated_decay
  ENST00000412964 CCDC138-002 108786757-108876578 protein_coding
  ENST00000447782 CCDC138-004 108786788-108794712 nonsense_mediated_decay
  ENST00000456512 CCDC138-006 108791716-108846780 protein_coding
  ENST00000470608 CCDC138-005 108786773-108794670 processed_transcript
  ENST00000608781 CCDC138-007 108856928-108885477 protein_coding
  ENST00000609740 CCDC138-008 108882191-108885475 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295124ENST00000412964ENST00000456512ENST00000470608ENST00000608781ENST00000609740
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295124 N/A 0.461±0.00 N/A N/A 0.273±0.00 N/A 0.068±0.00 N/A 0.103±0.00 0.325±0.00 N/A 0.770±0.58 0.146±0.10 4.831±0.93
ENST00000412964 N/A N/A 0.281±0.00 0.216±0.01 0.692±0.00 0.380±0.00 0.262±0.00 0.047±0.00 0.273±0.00 N/A N/A 0.511±0.14 0.060±0.00 N/A
ENST00000456512 0.125±0.00 N/A N/A 0.457±0.13 N/A 0.713±0.00 N/A 0.154±0.00 0.547±0.00 0.218±0.00 N/A N/A 0.130±0.00 N/A
ENST00000470608 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A
ENST00000608781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.328±0.00 N/A N/A N/A
ENST00000609740 0.026±0.00 0.359±0.00 0.332±0.00 0.292±0.11 0.146±0.00 0.371±0.00 0.031±0.00 0.277±0.07 0.147±0.00 0.333±0.00 0.081±0.00 0.935±0.61 0.140±0.11 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RA CIL_0007RA_0001 VISTA 2:108335931-108937600
CIL_00047P CIL_00047P_0001 CGP 2:108719481-108885477
CIL_00047O CIL_00047O_0001 CGP 2:108786757-108989372

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090554 CCDC138 coiled-coil domain containing 138 protein_coding Danio_rerio
ENSMUSG00000038010 Ccdc138 coiled-coil domain containing 138 protein_coding Mus_musculus

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