C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00047O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163006-ENSG00000135960 CGP 9606 2:108786757-108989372
GeneTranscriptPositionBiotype
ENSG00000135960 (EDAR)
ectodysplasin A receptor
ENST00000258443 (EDAR-001) 108894471-108989372 protein_coding
ENST00000376651 (EDAR-201) 108894478-108989372 protein_coding
ENST00000409271 (EDAR-002) 108894471-108989269 protein_coding
ENSG00000163006 (CCDC138)
coiled-coil domain containing 138
ENST00000295124 (CCDC138-001) 108786763-108876578 protein_coding
ENST00000409529 (CCDC138-003) 108786761-108876576 nonsense_mediated_decay
ENST00000412964 (CCDC138-002) 108786757-108876578 protein_coding
ENST00000447782 (CCDC138-004) 108786788-108794712 nonsense_mediated_decay
ENST00000456512 (CCDC138-006) 108791716-108846780 protein_coding
ENST00000470608 (CCDC138-005) 108786773-108794670 processed_transcript
ENST00000608781 (CCDC138-007) 108856928-108885477 protein_coding
ENST00000609740 (CCDC138-008) 108882191-108885475 retained_intron
ENSG00000227470 (AC073415.2)
ENST00000449240 (AC073415.2-001) 108878308-108878460 processed_pseudogene
CIL_00047O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038010-ENSMUSG00000003227 CGP 10090 10:58497970-58675654
GeneTranscriptPositionBiotype
ENSMUSG00000003227 (Edar)
ectodysplasin-A receptor
ENSMUST00000003312 (Edar-001) 58600789-58675654 protein_coding
ENSMUSG00000038010 (Ccdc138)
coiled-coil domain containing 138
ENSMUST00000036576 (Ccdc138-201) 58497970-58576242 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047O_0001ENSG00000135960ENST00000258443ENST00000376651ENST00000409271ENSG00000163006ENST00000295124ENST00000409529ENST00000412964ENST00000447782ENST00000456512ENST00000470608ENST00000608781ENST00000609740ENSG00000227470ENST00000449240CIL_00047O_0002ENSMUSG00000003227ENSMUST00000003312ENSMUSG00000038010ENSMUST00000036576
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047O_0001ENSG00000135960ENST00000258443ENST00000376651ENST00000409271ENSG00000163006ENST00000295124ENST00000412964ENST00000456512ENST00000470608ENST00000608781ENST00000609740ENSG00000227470ENST00000449240CIL_00047O_0002ENSMUSG00000003227ENSMUST00000003312ENSMUSG00000038010ENSMUST00000036576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135960 ENST00000258443 N/A 0.139±0.00 0.075±0.00 0.014±0.00 0.131±0.09 0.029±0.00 N/A 0.090±0.09 0.124±0.04 0.016±0.01 N/A 0.065±0.04 0.039±0.01 0.106±0.00
ENST00000376651 N/A N/A N/A 0.012±0.00 0.036±0.00 0.017±0.00 0.020±0.00 0.014±0.01 0.159±0.00 0.007±0.01 N/A 0.007±0.00 N/A N/A
ENST00000409271 N/A N/A N/A N/A N/A N/A 0.028±0.00 0.004±0.00 N/A 0.002±0.00 N/A 0.077±0.05 0.105±0.00 0.033±0.00
ENSG00000163006 ENST00000295124 N/A 0.461±0.00 N/A N/A 0.273±0.00 N/A 0.068±0.00 N/A 0.103±0.00 0.325±0.00 N/A 0.770±0.58 0.146±0.10 4.831±0.93
ENST00000409529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412964 N/A N/A 0.281±0.00 0.216±0.01 0.692±0.00 0.380±0.00 0.262±0.00 0.047±0.00 0.273±0.00 N/A N/A 0.511±0.14 0.060±0.00 N/A
ENST00000447782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456512 0.125±0.00 N/A N/A 0.457±0.13 N/A 0.713±0.00 N/A 0.154±0.00 0.547±0.00 0.218±0.00 N/A N/A 0.130±0.00 N/A
ENST00000470608 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A
ENST00000608781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.328±0.00 N/A N/A N/A
ENST00000609740 0.026±0.00 0.359±0.00 0.332±0.00 0.292±0.11 0.146±0.00 0.371±0.00 0.031±0.00 0.277±0.07 0.147±0.00 0.333±0.00 0.081±0.00 0.935±0.61 0.140±0.11 N/A
ENSG00000227470 ENST00000449240 N/A N/A N/A 1.424±1.04 5.022±4.66 N/A 0.255±0.00 N/A N/A N/A N/A 0.446±0.07 N/A 0.664±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003227 ENSMUST00000003312 0.076±0.07 0.056±0.03 0.623±0.07 0.260±0.10 0.231±0.06 0.354±0.07 0.107±0.04 0.196±0.06 0.016±0.02 0.386±0.06 0.061±0.02 0.457±0.27 0.083±0.07 0.440±0.11
ENSMUSG00000038010 ENSMUST00000036576 0.353±0.17 0.360±0.12 0.412±0.01 1.167±0.36 0.178±0.10 0.253±0.12 0.084±0.01 0.299±0.09 0.306±0.17 0.479±0.05 0.065±0.02 0.544±0.43 0.967±0.57 4.528±2.20

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