C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00047P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153201-ENSG00000163006 CGP 9606 2:108719481-108885477
GeneTranscriptPositionBiotype
ENSG00000153201 (RANBP2)
RAN binding protein 2 		ENST00000283195 (RANBP2-001) 108719481-108785811 protein_coding
ENST00000425282 (RANBP2-011) 108719553-108735551 nonsense_mediated_decay
ENST00000495506 (RANBP2-008) 108751551-108753097 retained_intron
ENST00000495924 (RANBP2-009) 108730817-108731898 retained_intron
ENSG00000163006 (CCDC138)
coiled-coil domain containing 138 		ENST00000295124 (CCDC138-001) 108786763-108876578 protein_coding
ENST00000409529 (CCDC138-003) 108786761-108876576 nonsense_mediated_decay
ENST00000412964 (CCDC138-002) 108786757-108876578 protein_coding
ENST00000447782 (CCDC138-004) 108786788-108794712 nonsense_mediated_decay
ENST00000456512 (CCDC138-006) 108791716-108846780 protein_coding
ENST00000470608 (CCDC138-005) 108786773-108794670 processed_transcript
ENST00000608781 (CCDC138-007) 108856928-108885477 protein_coding
ENST00000609740 (CCDC138-008) 108882191-108885475 retained_intron
ENSG00000227470 (AC073415.2)
 ENST00000449240 (AC073415.2-001) 108878308-108878460 processed_pseudogene
CIL_00047P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003226-ENSMUSG00000038010 CGP 10090 10:58446852-58576242
GeneTranscriptPositionBiotype
ENSMUSG00000003226 (Ranbp2)
RAN binding protein 2 		ENSMUST00000003310 (Ranbp2-201) 58446852-58494155 protein_coding
ENSMUSG00000038010 (Ccdc138)
coiled-coil domain containing 138 		ENSMUST00000036576 (Ccdc138-201) 58497970-58576242 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047P_0001ENSG00000153201ENST00000283195ENST00000425282ENST00000495506ENST00000495924ENSG00000163006ENST00000295124ENST00000409529ENST00000412964ENST00000447782ENST00000456512ENST00000470608ENST00000608781ENST00000609740ENSG00000227470ENST00000449240CIL_00047P_0002ENSMUSG00000003226ENSMUST00000003310ENSMUSG00000038010ENSMUST00000036576
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00047P_0001ENSG00000153201ENST00000283195ENSG00000163006ENST00000295124ENST00000412964ENST00000456512ENST00000470608ENST00000608781ENST00000609740ENSG00000227470ENST00000449240CIL_00047P_0002ENSMUSG00000003226ENSMUST00000003310ENSMUSG00000038010ENSMUST00000036576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153201 ENST00000283195 5.852±0.00 5.759±0.00 3.218±0.00 6.883±1.52 7.083±0.85 4.405±0.30 3.678±1.79 5.743±0.52 4.427±1.29 5.120±0.16 2.580±0.06 9.674±6.64 3.797±2.24 16.195±3.94
ENST00000425282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163006 ENST00000295124 N/A 0.461±0.00 N/A N/A 0.273±0.00 N/A 0.068±0.00 N/A 0.103±0.00 0.325±0.00 N/A 0.770±0.58 0.146±0.10 4.831±0.93
ENST00000409529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412964 N/A N/A 0.281±0.00 0.216±0.01 0.692±0.00 0.380±0.00 0.262±0.00 0.047±0.00 0.273±0.00 N/A N/A 0.511±0.14 0.060±0.00 N/A
ENST00000447782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456512 0.125±0.00 N/A N/A 0.457±0.13 N/A 0.713±0.00 N/A 0.154±0.00 0.547±0.00 0.218±0.00 N/A N/A 0.130±0.00 N/A
ENST00000470608 0.252±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A
ENST00000608781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.328±0.00 N/A N/A N/A
ENST00000609740 0.026±0.00 0.359±0.00 0.332±0.00 0.292±0.11 0.146±0.00 0.371±0.00 0.031±0.00 0.277±0.07 0.147±0.00 0.333±0.00 0.081±0.00 0.935±0.61 0.140±0.11 N/A
ENSG00000227470 ENST00000449240 N/A N/A N/A 1.424±1.04 5.022±4.66 N/A 0.255±0.00 N/A N/A N/A N/A 0.446±0.07 N/A 0.664±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003226 ENSMUST00000003310 3.041±0.10 4.498±2.00 4.449±0.00 6.538±5.79 3.303±1.55 3.276±0.37 1.503±0.48 3.618±0.45 4.143±2.34 4.415±1.68 1.662±0.75 7.233±4.78 15.378±8.91 3.238±1.49
ENSMUSG00000038010 ENSMUST00000036576 0.353±0.17 0.360±0.12 0.412±0.01 1.167±0.36 0.178±0.10 0.253±0.12 0.084±0.01 0.299±0.09 0.306±0.17 0.479±0.05 0.065±0.02 0.544±0.43 0.967±0.57 4.528±2.20

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