C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CGG triplet repeat binding protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163320 CGGBP1 9606 - 3:88051944-88149885 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309534 CGGBP1-001 88051944-88059048 protein_coding
  ENST00000398392 CGGBP1-003 88052012-88057309 protein_coding
  ENST00000462901 CGGBP1-004 88055426-88149885 protein_coding
  ENST00000467332 CGGBP1-005 88055658-88149815 protein_coding
  ENST00000474441 CGGBP1-006 88057638-88058945 processed_transcript
  ENST00000482016 CGGBP1-002 88055414-88059068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309534ENST00000398392ENST00000462901ENST00000482016
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309534 13.099±0.00 10.039±0.00 4.266±0.00 9.952±2.22 10.025±3.19 10.079±3.55 6.559±3.57 10.238±5.84 6.724±1.57 7.840±2.93 5.619±3.65 14.799±6.60 7.661±0.43 10.897±4.12
ENST00000398392 N/A N/A N/A N/A N/A 1.803±0.00 N/A N/A N/A 2.396±0.00 N/A N/A N/A N/A
ENST00000462901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.541±0.00 N/A N/A N/A
ENST00000482016 N/A N/A N/A N/A N/A N/A N/A 7.740±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IMP RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003690 TAS double-stranded DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000054604 Cggbp1 CGG triplet repeat binding protein 1 protein_coding Mus_musculus

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