C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CGG triplet repeat binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309534 CGGBP1-001 ENSG00000163320 9606 - 3:88051944-88059048 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309534
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309534 13.099±0.00 10.039±0.00 4.266±0.00 9.952±2.22 10.025±3.19 10.079±3.55 6.559±3.57 10.238±5.84 6.724±1.57 7.840±2.93 5.619±3.65 14.799±6.60 7.661±0.43 10.897±4.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IMP RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003690 TAS double-stranded DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067744 Cggbp1-001 protein_coding Mus_musculus 0 1238
ENSMUST00000136532 Cggbp1-002 retained_intron Mus_musculus 0 686

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