C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CGG triplet repeat binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462901 CGGBP1-004 ENSG00000163320 9606 - 3:88055426-88149885 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000462901
Transcript ID Muscle
ENST00000462901 2.541±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000977 IMP RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003690 TAS double-stranded DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067744 Cggbp1-001 protein_coding Mus_musculus 0 830
ENSMUST00000136532 Cggbp1-002 retained_intron Mus_musculus 0 688
ENSMUST00000052588 Zfp654-201 protein_coding Mus_musculus 1e-32 145

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