C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163462 TRIM46 9606 + 1:155173787-155184971 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334634 TRIM46-001 155173967-155184971 protein_coding
  ENST00000368382 TRIM46-002 155173909-155184969 protein_coding
  ENST00000368383 TRIM46-004 155173900-155182862 protein_coding
  ENST00000368385 TRIM46-003 155173878-155180621 protein_coding
  ENST00000392451 TRIM46-201 155173787-155184971 protein_coding
  ENST00000464760 TRIM46-007 155174601-155178156 processed_transcript
  ENST00000468878 TRIM46-006 155174754-155184951 processed_transcript
  ENST00000474430 TRIM46-005 155173900-155182862 processed_transcript
  ENST00000543729 TRIM46-202 155173891-155179935 protein_coding
  ENST00000545012 TRIM46-203 155173787-155184971 protein_coding
  ENST00000611379 TRIM46-204 155174754-155184971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334634ENST00000368382ENST00000368383ENST00000368385ENST00000464760ENST00000468878ENST00000474430ENST00000543729ENST00000545012ENST00000611379
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334634 N/A N/A N/A 0.331±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.257±0.00 N/A N/A
ENST00000368383 0.018±0.00 N/A 0.011±0.00 N/A N/A 0.043±0.00 0.044±0.00 0.053±0.00 N/A N/A 0.011±0.00 N/A 0.011±0.00 N/A
ENST00000368385 N/A 0.224±0.00 N/A N/A 0.097±0.00 N/A 0.070±0.00 N/A N/A N/A N/A 0.267±0.00 N/A 0.349±0.00
ENST00000464760 N/A N/A N/A 2.171±0.00 0.585±0.00 N/A 0.087±0.00 N/A N/A 0.311±0.00 N/A 0.317±0.00 0.088±0.00 0.398±0.00
ENST00000468878 N/A 0.505±0.00 N/A N/A 0.063±0.00 N/A N/A N/A 0.033±0.00 0.057±0.00 N/A N/A N/A 0.646±0.11
ENST00000474430 0.009±0.00 0.088±0.00 0.011±0.00 1.069±0.00 0.150±0.00 N/A 0.013±0.00 0.036±0.00 N/A 0.350±0.00 0.006±0.00 N/A 0.011±0.00 0.268±0.00
ENST00000543729 N/A N/A N/A 1.388±0.48 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545012 N/A N/A N/A N/A N/A 0.166±0.06 N/A 0.056±0.00 N/A N/A 0.025±0.00 0.329±0.10 0.217±0.00 0.188±0.00
ENST00000611379 N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012367 TRIM46 (1 of 2) tripartite motif containing 46 protein_coding Danio_rerio
ENSDARG00000058649 trim46b tripartite motif containing 46b protein_coding Danio_rerio
ENSMUSG00000042766 Trim46 tripartite motif-containing 46 protein_coding Mus_musculus

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