C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545012 TRIM46-203 ENSG00000163462 9606 + 1:155173787-155184971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyMuscleOvaryPlacentaTestisENST00000545012
Transcript ID Colon Kidney Muscle Ovary Placenta Testis
ENST00000545012 0.166±0.06 0.056±0.00 0.025±0.00 0.329±0.10 0.217±0.00 0.188±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041022 Trim46-001 protein_coding Mus_musculus 0 2891
ENSMUST00000107464 Trim46-004 protein_coding Mus_musculus 0 2891
ENSMUST00000090924 Trim46-003 protein_coding Mus_musculus 0 1653
ENSMUST00000143637 Trim46-002 nonsense_mediated_decay Mus_musculus 0 1341
ENSMUST00000139419 Trim46-005 processed_transcript Mus_musculus 0 532

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