C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shugoshin-like 2 (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163535 SGOL2 9606 + 2:200510008-200583782 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357799 SGOL2-001 200526157-200583782 protein_coding
  ENST00000409203 SGOL2-002 200526167-200570142 protein_coding
  ENST00000418045 SGOL2-003 200510008-200535124 protein_coding
  ENST00000460534 SGOL2-004 200531775-200533375 processed_transcript
  ENST00000469840 SGOL2-006 200535141-200543622 processed_transcript
  ENST00000488636 SGOL2-005 200535046-200542950 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000357799
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000357799 0.144±0.00 0.599±0.00 0.402±0.09 0.211±0.08 0.667±0.00 0.304±0.00 0.267±0.00 2.106±1.61 0.483±0.43 13.011±4.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B2 CIL_0002B2_0001 CGP 2:200305881-200519784
CIL_0002AZ CIL_0002AZ_0001 CGP 2:200488952-200583782
CIL_0002B0 CIL_0002B0_0001 CGP 2:200510008-200677064

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 IEA:IDA chromosome, centromeric region
GO:0000776 IEA kinetochore
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0030892 IDA mitotic cohesin complex
GO:0051754 IEA meiotic sister chromatid cohesion, centromeric

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026039 Sgol2 shugoshin-like 2 (S. pombe) protein_coding Mus_musculus
ENSMUSG00000094443 Gm4975 predicted gene 4975 protein_coding Mus_musculus

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