C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shugoshin-like 2 (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357799 SGOL2-001 ENSG00000163535 9606 + 2:200526157-200583782 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000357799
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000357799 0.144±0.00 0.599±0.00 0.402±0.09 0.211±0.08 0.667±0.00 0.304±0.00 0.267±0.00 2.106±1.61 0.483±0.43 13.011±4.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B2 CIL_0002B2_0001 CGP 2:200305881-200519784
CIL_0002AZ CIL_0002AZ_0001 CGP 2:200488952-200583782
CIL_0002B0 CIL_0002B0_0001 CGP 2:200510008-200677064

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000775 IEA:IDA chromosome, centromeric region
GO:0000776 IEA kinetochore
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0030892 IDA mitotic cohesin complex
GO:0051754 IEA meiotic sister chromatid cohesion, centromeric

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027202 Sgol2-001 protein_coding Mus_musculus 0 627
ENSMUST00000179944 Gm4975-201 protein_coding Mus_musculus 0 573

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