C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 4 open reading frame 36
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163633 C4orf36 9606 - 4:86876205-86936202 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295898 C4orf36-001 86876205-86892395 protein_coding
  ENST00000462714 C4orf36-003 86886797-86892410 nonsense_mediated_decay
  ENST00000473559 C4orf36-002 86886472-86934732 protein_coding
  ENST00000503001 C4orf36-012 86888140-86936178 processed_transcript
  ENST00000503159 C4orf36-006 86935451-86936202 processed_transcript
  ENST00000504008 C4orf36-008 86887871-86892413 protein_coding
  ENST00000504371 C4orf36-010 86888160-86892422 processed_transcript
  ENST00000506308 C4orf36-011 86887775-86892416 protein_coding
  ENST00000506484 C4orf36-005 86925867-86936179 retained_intron
  ENST00000508280 C4orf36-004 86924894-86934850 retained_intron
  ENST00000509262 C4orf36-007 86933165-86934542 retained_intron
  ENST00000512468 C4orf36-009 86887845-86892320 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295898ENST00000462714ENST00000473559ENST00000503001ENST00000503159ENST00000506308ENST00000506484ENST00000508280ENST00000509262ENST00000512468
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.647±0.00
ENST00000462714 0.303±0.00 N/A N/A 0.207±0.00 N/A N/A N/A N/A N/A 0.410±0.00 N/A 0.524±0.08 N/A 0.775±0.00
ENST00000473559 0.345±0.00 0.930±0.00 0.399±0.00 1.155±0.00 0.826±0.23 0.381±0.00 0.672±0.33 1.218±0.00 0.413±0.24 0.175±0.00 N/A 0.518±0.29 0.500±0.08 0.948±0.08
ENST00000503001 N/A N/A N/A N/A N/A 0.797±0.00 N/A N/A N/A 0.404±0.00 N/A N/A N/A N/A
ENST00000503159 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A
ENST00000506308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.326±0.00
ENST00000506484 N/A N/A N/A N/A 0.870±0.00 N/A N/A N/A 0.251±0.00 1.329±0.00 0.859±0.00 N/A 1.929±0.00 N/A
ENST00000508280 0.327±0.00 N/A 1.058±0.00 0.136±0.00 0.743±0.30 0.615±0.20 0.417±0.00 0.645±0.00 0.459±0.00 0.633±0.00 0.202±0.00 0.270±0.00 1.558±0.00 N/A
ENST00000509262 N/A N/A N/A N/A N/A 1.511±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006J3 CIL_0006J3_0001 CGP 4:86823468-86936202
CIL_0006J2 CIL_0006J2_0001 CGP 4:86876205-87141054

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029320 1700016H13Rik RIKEN cDNA 1700016H13 gene protein_coding Mus_musculus

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