C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline-rich transmembrane protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163704 PRRT3 9606 - 3:9945542-9952394 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295984 PRRT3-003 9945542-9952374 nonsense_mediated_decay
  ENST00000411976 PRRT3-004 9948580-9952390 protein_coding
  ENST00000412055 PRRT3-001 9945542-9952394 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295984ENST00000411976ENST00000412055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295984 N/A N/A 0.457±0.00 N/A N/A N/A N/A N/A 0.917±0.00 0.095±0.00 0.061±0.00 0.753±0.54 0.201±0.06 0.587±0.30
ENST00000411976 N/A N/A N/A 1.085±0.00 N/A 0.228±0.00 0.216±0.00 0.249±0.00 0.411±0.00 0.028±0.00 0.095±0.00 N/A N/A N/A
ENST00000412055 0.721±0.00 1.419±0.00 0.075±0.00 4.140±2.97 1.227±0.00 0.467±0.00 0.333±0.00 0.917±0.00 0.232±0.00 0.722±0.69 0.817±0.00 1.006±1.05 0.491±0.14 1.382±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059A CIL_00059A_0001 CGP 3:9933822-9952394
CIL_0002CD CIL_0002CD_0001 CGP 3:9945542-10011116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077087 PRRT3 proline-rich transmembrane protein 3 protein_coding Danio_rerio
ENSMUSG00000045009 Prrt3 proline-rich transmembrane protein 3 protein_coding Mus_musculus

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