C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: YEATS domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163872 YEATS2 9606 + 3:183697818-183812625 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305135 YEATS2-001 183697818-183812625 protein_coding
  ENST00000432781 YEATS2-003 183775991-183793486 protein_coding
  ENST00000468850 YEATS2-007 183808933-183810808 retained_intron
  ENST00000472593 YEATS2-004 183800977-183812623 retained_intron
  ENST00000481343 YEATS2-006 183808024-183809479 retained_intron
  ENST00000497765 YEATS2-005 183797996-183801692 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305135ENST00000432781ENST00000472593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305135 3.803±0.00 2.188±0.00 0.444±0.00 2.829±0.70 1.788±0.00 2.379±1.75 1.044±0.83 2.730±0.00 1.428±0.45 2.304±0.44 0.733±0.65 6.237±0.68 3.897±0.61 3.856±1.20
ENST00000432781 N/A 4.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472593 N/A 0.672±0.00 0.622±0.00 N/A 1.485±0.00 0.982±0.00 0.199±0.00 N/A N/A 0.944±0.00 N/A 2.102±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G1 CIL_0005G1_0001 CGP 3:183635568-183812625
CIL_0003YG CIL_0003YG_0002 CGP 3:183697818-183825594

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0017025 IPI TBP-class protein binding
GO:0043966 IDA histone H3 acetylation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0072686 IEA mitotic spindle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000097253 YEATS domain containing 2 protein_coding Danio_rerio
ENSMUSG00000041215 Yeats2 YEATS domain containing 2 protein_coding Mus_musculus

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