C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003YG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000097253-ENSDARG00000079777 CGP 7955 2:44728206-44782052
GeneTranscriptPositionBiotype
ENSDARG00000078767 (yeats2)
YEATS domain containing 2
ENSDART00000113232 (yeats2-201) 44677192-44756745 protein_coding
ENSDART00000156523 (yeats2-001) 44676654-44718408 protein_coding
ENSDARG00000079777 (map6d1)
MAP6 domain containing 1
ENSDART00000146380 (map6d1-001) 44759069-44782052 protein_coding
ENSDARG00000097253 ()
YEATS domain containing 2
ENSDART00000139137 () 44728206-44754816 protein_coding
ENSDART00000141605 () 44748648-44752172 protein_coding
CIL_0003YG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163872-ENSG00000180834 CGP 9606 3:183697818-183825594
GeneTranscriptPositionBiotype
ENSG00000163872 (YEATS2)
YEATS domain containing 2
ENST00000305135 (YEATS2-001) 183697818-183812625 protein_coding
ENST00000432781 (YEATS2-003) 183775991-183793486 protein_coding
ENST00000468850 (YEATS2-007) 183808933-183810808 retained_intron
ENST00000472593 (YEATS2-004) 183800977-183812623 retained_intron
ENST00000481343 (YEATS2-006) 183808024-183809479 retained_intron
ENST00000497765 (YEATS2-005) 183797996-183801692 retained_intron
ENSG00000180834 (MAP6D1)
MAP6 domain containing 1
ENST00000318631 (MAP6D1-001) 183815876-183825578 protein_coding
ENST00000431348 (MAP6D1-002) 183817062-183825594 protein_coding
ENST00000445426 (MAP6D1-003) 183817377-183825521 nonsense_mediated_decay
ENST00000463801 (MAP6D1-004) 183820163-183825225 processed_transcript
CIL_0003YG_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041215-ENSMUSG00000041205 CGP 10090 16:20141063-20241358
GeneTranscriptPositionBiotype
ENSMUSG00000041205 (Map6d1)
MAP6 domain containing 1
ENSMUST00000040880 (Map6d1-201) 20233310-20241358 protein_coding
ENSMUSG00000041215 (Yeats2)
YEATS domain containing 2
ENSMUST00000090052 (Yeats2-201) 20141063-20232573 protein_coding
ENSMUST00000115560 (Yeats2-202) 20141063-20232573 protein_coding
ENSMUSG00000084838 (Gm10241)
predicted pseudogene 10241
ENSMUST00000117664 (Gm10241-001) 20176727-20177012 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YG_0001ENSDARG00000078767ENSDART00000113232ENSDART00000156523ENSDARG00000079777ENSDART00000146380ENSDARG00000097253ENSDART00000139137ENSDART00000141605CIL_0003YG_0002ENSG00000163872ENST00000305135ENST00000432781ENST00000468850ENST00000472593ENST00000481343ENST00000497765ENSG00000180834ENST00000318631ENST00000431348ENST00000445426ENST00000463801CIL_0003YG_0003ENSMUSG00000041205ENSMUST00000040880ENSMUSG00000041215ENSMUST00000090052ENSMUST00000115560ENSMUSG00000084838ENSMUST00000117664
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YG_0001ENSDARG00000078767ENSDART00000113232ENSDARG00000079777ENSDART00000146380ENSDARG00000097253ENSDART00000139137CIL_0003YG_0002ENSG00000163872ENST00000305135ENST00000432781ENST00000472593ENSG00000180834ENST00000318631ENST00000431348ENST00000463801CIL_0003YG_0003ENSMUSG00000041205ENSMUST00000040880ENSMUSG00000041215ENSMUST00000090052ENSMUST00000115560ENSMUSG00000084838ENSMUST00000117664
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078767 ENSDART00000113232 N/A N/A N/A 1.607±0.52 N/A N/A 1.220±0.18 1.323±0.14 0.186±0.00 N/A 0.572±0.00 N/A N/A N/A
ENSDART00000156523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000079777 ENSDART00000146380 N/A N/A N/A 3.245±0.00 N/A N/A 1.435±1.36 0.776±0.31 0.029±0.00 N/A 0.963±0.00 N/A N/A N/A
ENSDARG00000097253 ENSDART00000139137 N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A 0.428±0.00 N/A N/A N/A
ENSDART00000141605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163872 ENST00000305135 3.803±0.00 2.188±0.00 0.444±0.00 2.829±0.70 1.788±0.00 2.379±1.75 1.044±0.83 2.730±0.00 1.428±0.45 2.304±0.44 0.733±0.65 6.237±0.68 3.897±0.61 3.856±1.20
ENST00000432781 N/A 4.428±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472593 N/A 0.672±0.00 0.622±0.00 N/A 1.485±0.00 0.982±0.00 0.199±0.00 N/A N/A 0.944±0.00 N/A 2.102±0.00 N/A N/A
ENST00000481343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000180834 ENST00000318631 0.398±0.00 1.343±0.00 N/A 17.260±13.01 0.479±0.00 0.574±0.00 N/A 0.032±0.00 0.081±0.02 N/A 1.695±0.00 0.975±0.37 0.480±0.08 1.349±0.00
ENST00000431348 N/A N/A N/A N/A N/A N/A N/A N/A 0.128±0.00 N/A 1.722±0.00 N/A N/A N/A
ENST00000445426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.490±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000041205 ENSMUST00000040880 0.099±0.06 4.994±1.29 0.218±0.06 2.116±1.06 0.301±0.04 0.069±0.02 0.128±0.05 0.056±0.02 0.037±0.01 0.028±0.02 0.027±0.01 1.717±0.72 0.048±0.03 0.586±0.32
ENSMUSG00000041215 ENSMUST00000090052 2.062±0.33 1.161±0.00 1.083±0.00 2.401±0.60 0.849±0.26 1.230±0.29 N/A 0.594±0.12 0.970±0.44 1.511±0.00 0.610±0.41 4.131±2.28 2.076±1.69 0.501±0.00
ENSMUST00000115560 6.927±3.33 5.395±1.11 7.892±0.01 10.194±6.22 5.234±1.21 3.564±1.50 1.071±0.27 2.861±0.76 2.350±1.48 5.696±0.42 0.716±0.15 10.194±2.58 4.182±1.30 2.095±0.40
ENSMUSG00000084838 ENSMUST00000117664 N/A N/A 3.108±0.00 5.715±0.00 N/A N/A N/A N/A 9.581±0.00 N/A N/A N/A N/A N/A

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