C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: YEATS domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305135 YEATS2-001 ENSG00000163872 9606 + 3:183697818-183812625 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305135 3.803±0.00 2.188±0.00 0.444±0.00 2.829±0.70 1.788±0.00 2.379±1.75 1.044±0.83 2.730±0.00 1.428±0.45 2.304±0.44 0.733±0.65 6.237±0.68 3.897±0.61 3.856±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G1 CIL_0005G1_0001 CGP 3:183635568-183812625
CIL_0003YG CIL_0003YG_0002 CGP 3:183697818-183825594

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0006325 TAS chromatin organization
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0017025 IPI TBP-class protein binding
GO:0043966 IDA histone H3 acetylation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0072686 IEA mitotic spindle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115560 Yeats2-202 protein_coding Mus_musculus 0 2712
ENSMUST00000090052 Yeats2-201 protein_coding Mus_musculus 0 2516

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