C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: inturned planar cell polarity protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164066 INTU 9606 + 4:127623271-127726737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335251 INTU-003 127632932-127726737 protein_coding
  ENST00000503626 INTU-004 127632957-127716775 nonsense_mediated_decay
  ENST00000503952 INTU-002 127632966-127716479 nonsense_mediated_decay
  ENST00000504276 INTU-006 127674154-127685950 retained_intron
  ENST00000504491 INTU-005 127623271-127644036 protein_coding
  ENST00000506283 INTU-008 127687814-127705772 protein_coding
  ENST00000510766 INTU-009 127706804-127716385 nonsense_mediated_decay
  ENST00000512995 INTU-007 127699257-127706543 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335251ENST00000503626ENST00000503952ENST00000504491ENST00000510766ENST00000512995
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335251 0.060±0.00 0.229±0.00 0.921±0.25 0.380±0.00 0.164±0.00 0.116±0.00 0.218±0.11 0.342±0.00 N/A 0.059±0.00 0.202±0.00 0.262±0.00 N/A
ENST00000503626 N/A N/A 1.304±0.00 1.023±0.00 0.662±0.00 0.668±0.00 N/A 0.579±0.00 0.776±0.00 0.158±0.00 0.932±0.60 N/A 1.358±0.00
ENST00000503952 N/A N/A N/A 0.833±0.00 N/A 0.262±0.00 N/A 0.708±0.00 0.745±0.11 N/A N/A 0.182±0.00 0.694±0.00
ENST00000504491 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.533±0.00 N/A N/A N/A
ENST00000510766 N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A
ENST00000512995 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.924±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RF CIL_0008RF_0001 VISTA 4:127185130-127786590
CIL_0007AH CIL_0007AH_0001 CGP 4:127623271-127774299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0007399 ISS nervous system development
GO:0008589 ISS regulation of smoothened signaling pathway
GO:0010839 IEA negative regulation of keratinocyte proliferation
GO:0021513 IEA spinal cord dorsal/ventral patterning
GO:0030216 IEA keratinocyte differentiation
GO:0031069 IEA hair follicle morphogenesis
GO:0042384 ISS cilium assembly
GO:0045880 IEA positive regulation of smoothened signaling pathway
GO:0051782 IEA negative regulation of cell division
GO:0060173 ISS limb development
GO:0060271 IEA cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077639 INTU Protein inturned protein_coding Danio_rerio
ENSMUSG00000060798 Intu inturned planar cell polarity effector homolog (Drosophila) protein_coding Mus_musculus

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