C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008RF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2417 VISTA 9606 4:127185130-127786590
GeneTranscriptPositionBiotype
ENSG00000151475 (SLC25A31)
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 		ENST00000281154 (SLC25A31-001) 127730378-127774299 protein_coding
ENSG00000164066 (INTU)
inturned planar cell polarity protein 		ENST00000335251 (INTU-003) 127632932-127726737 protein_coding
ENST00000503626 (INTU-004) 127632957-127716775 nonsense_mediated_decay
ENST00000503952 (INTU-002) 127632966-127716479 nonsense_mediated_decay
ENST00000504276 (INTU-006) 127674154-127685950 retained_intron
ENST00000504491 (INTU-005) 127623271-127644036 protein_coding
ENST00000506283 (INTU-008) 127687814-127705772 protein_coding
ENST00000510766 (INTU-009) 127706804-127716385 nonsense_mediated_decay
ENST00000512995 (INTU-007) 127699257-127706543 processed_transcript
ENSG00000164070 (HSPA4L)
heat shock 70kDa protein 4-like 		ENST00000296464 (HSPA4L-001) 127782140-127840733 protein_coding
ENST00000505726 (HSPA4L-002) 127783549-127832968 protein_coding
ENST00000508549 (HSPA4L-004) 127782322-127820469 protein_coding
ENST00000508776 (HSPA4L-003) 127781821-127833042 protein_coding
ENST00000515262 (HSPA4L-005) 127813018-127820521 processed_transcript
ENSG00000248491 (RP11-125O18.1)
 ENST00000504050 (RP11-125O18.1-001) 127097098-127470552 lincRNA
ENST00000509671 (RP11-125O18.1-003) 127401726-127470569 lincRNA
ENST00000513519 (RP11-125O18.1-002) 127096891-127106771 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008RF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2417 VISTA 10090 3:40152073-40754343
GeneTranscriptPositionBiotype
ENSMUSG00000025757 (Hspa4l)
heat shock protein 4 like 		ENSMUST00000077083 (Hspa4l-001) 40745430-40796103 protein_coding
ENSMUST00000108086 (Hspa4l-004) 40745868-40789584 protein_coding
ENSMUST00000159819 (Hspa4l-003) 40745382-40781598 protein_coding
ENSMUST00000160026 (Hspa4l-007) 40784010-40786820 retained_intron
ENSMUST00000161806 (Hspa4l-002) 40745583-40758596 retained_intron
ENSMUST00000162279 (Hspa4l-005) 40744495-40757069 protein_coding
ENSMUST00000162743 (Hspa4l-006) 40772644-40781840 protein_coding
ENSMUSG00000037884 (1700017G19Rik)
RIKEN cDNA 1700017G19 gene 		ENSMUST00000035860 (1700017G19Rik-001) 40504867-40522912 lincRNA
ENSMUST00000179966 (1700017G19Rik-002) 40508430-40509770 lincRNA
ENSMUSG00000060798 (Intu)
inturned planar cell polarity effector homolog (Drosophila) 		ENSMUST00000061590 (Intu-002) 40531286-40654617 protein_coding
ENSMUST00000091186 (Intu-001) 40540767-40704774 protein_coding
ENSMUSG00000069041 (Slc25a31)
solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31 		ENSMUST00000091184 (Slc25a31-001) 40708855-40725593 protein_coding
ENSMUSG00000089932 (Gm16114)
predicted gene 16114 		ENSMUST00000161930 (Gm16114-001) 40658867-40659166 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RF_0001ENSG00000151475ENST00000281154ENSG00000164066ENST00000335251ENST00000503626ENST00000503952ENST00000504276ENST00000504491ENST00000506283ENST00000510766ENST00000512995ENSG00000164070ENST00000296464ENST00000505726ENST00000508549ENST00000508776ENST00000515262ENSG00000248491ENST00000504050ENST00000509671ENST00000513519CIL_0008RF_0002ENSMUSG00000025757ENSMUST00000077083ENSMUST00000108086ENSMUST00000159819ENSMUST00000160026ENSMUST00000161806ENSMUST00000162279ENSMUST00000162743ENSMUSG00000037884ENSMUST00000035860ENSMUST00000179966ENSMUSG00000060798ENSMUST00000061590ENSMUST00000091186ENSMUSG00000069041ENSMUST00000091184ENSMUSG00000089932ENSMUST00000161930
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RF_0001ENSG00000151475ENST00000281154ENSG00000164066ENST00000335251ENST00000503626ENST00000503952ENST00000504491ENST00000510766ENST00000512995ENSG00000164070ENST00000296464ENST00000505726ENST00000508549ENST00000508776ENSG00000248491ENST00000504050ENST00000509671ENST00000513519CIL_0008RF_0002ENSMUSG00000025757ENSMUST00000077083ENSMUST00000108086ENSMUST00000159819ENSMUST00000160026ENSMUST00000161806ENSMUST00000162279ENSMUSG00000037884ENSMUST00000035860ENSMUST00000179966ENSMUSG00000060798ENSMUST00000061590ENSMUST00000091186ENSMUSG00000069041ENSMUST00000091184ENSMUSG00000089932ENSMUST00000161930
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151475 ENST00000281154 N/A 0.010±0.00 N/A 0.021±0.00 0.010±0.00 N/A 0.005±0.00 N/A N/A 0.045±0.00 N/A 0.029±0.02 N/A 22.531±9.04
ENSG00000164066 ENST00000335251 0.060±0.00 0.229±0.00 N/A 0.921±0.25 0.380±0.00 0.164±0.00 0.116±0.00 0.218±0.11 0.342±0.00 N/A 0.059±0.00 0.202±0.00 0.262±0.00 N/A
ENST00000503626 N/A N/A N/A 1.304±0.00 1.023±0.00 0.662±0.00 0.668±0.00 N/A 0.579±0.00 0.776±0.00 0.158±0.00 0.932±0.60 N/A 1.358±0.00
ENST00000503952 N/A N/A N/A N/A 0.833±0.00 N/A 0.262±0.00 N/A 0.708±0.00 0.745±0.11 N/A N/A 0.182±0.00 0.694±0.00
ENST00000504276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.533±0.00 N/A N/A N/A
ENST00000506283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510766 N/A N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A
ENST00000512995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.924±0.00 N/A N/A N/A
ENSG00000164070 ENST00000296464 0.255±0.00 0.343±0.00 0.534±0.00 2.964±0.00 0.620±0.35 1.023±0.47 0.531±0.06 0.967±0.00 0.473±0.01 0.595±0.00 0.149±0.00 0.370±0.22 0.108±0.03 3.135±0.00
ENST00000505726 0.362±0.00 N/A 2.596±0.00 6.420±0.00 1.846±0.00 N/A 0.520±0.00 0.235±0.00 0.830±0.00 0.808±0.00 0.244±0.13 0.455±0.32 N/A N/A
ENST00000508549 N/A N/A 1.102±0.00 N/A N/A N/A N/A 0.830±0.00 N/A 0.703±0.00 N/A N/A N/A N/A
ENST00000508776 N/A N/A N/A 4.684±0.00 N/A 2.047±0.00 0.854±0.31 4.081±0.00 N/A 1.062±0.00 N/A 0.658±0.45 0.238±0.12 46.094±7.33
ENST00000515262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248491 ENST00000504050 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.351±0.00 N/A N/A N/A 0.190±0.00
ENST00000509671 0.101±0.00 0.213±0.00 N/A 0.125±0.00 N/A 0.103±0.00 0.103±0.00 N/A N/A N/A N/A N/A N/A 0.278±0.00
ENST00000513519 N/A N/A 0.658±0.00 N/A 0.065±0.00 N/A N/A N/A N/A 1.261±0.00 N/A N/A N/A 0.095±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025757 ENSMUST00000077083 1.105±0.26 3.170±1.20 1.687±0.10 4.197±0.78 1.340±0.38 2.016±0.13 2.588±0.39 1.823±0.65 1.848±0.88 4.145±0.63 0.165±0.06 2.130±0.91 1.605±0.78 11.193±2.86
ENSMUST00000108086 N/A N/A 1.322±0.20 14.650±12.42 N/A N/A N/A N/A 1.778±0.68 N/A 0.708±0.20 7.659±1.64 3.322±2.11 90.513±79.05
ENSMUST00000159819 1.145±0.31 5.032±2.49 N/A N/A 1.039±0.07 2.564±1.31 1.857±0.20 1.564±0.10 0.977±0.13 3.525±1.76 N/A 4.041±0.36 N/A 52.399±5.60
ENSMUST00000160026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.134±0.00 5.474±2.31 451.688±0.00
ENSMUST00000161806 N/A 14.196±2.56 N/A N/A 2.582±0.00 3.508±0.63 N/A N/A N/A N/A N/A 6.200±3.37 N/A N/A
ENSMUST00000162279 N/A 14.888±0.00 N/A N/A N/A N/A N/A N/A 1.773±0.00 N/A N/A 3.916±0.00 N/A N/A
ENSMUST00000162743 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037884 ENSMUST00000035860 0.018±0.00 N/A N/A 0.012±0.00 N/A N/A 0.014±0.00 0.018±0.00 0.008±0.00 N/A 0.018±0.00 0.009±0.00 0.012±0.00 4.907±0.30
ENSMUST00000179966 N/A 0.224±0.01 0.014±0.00 N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A 27.030±6.20
ENSMUSG00000060798 ENSMUST00000061590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.597±0.00
ENSMUST00000091186 0.652±0.48 0.746±0.37 0.705±0.13 2.818±1.53 0.590±0.36 1.186±0.23 3.828±0.57 1.835±0.28 0.692±0.14 1.801±0.25 0.481±0.13 1.706±0.59 0.724±0.37 0.864±0.54
ENSMUSG00000069041 ENSMUST00000091184 0.066±0.04 N/A 0.061±0.02 0.054±0.03 0.101±0.04 0.095±0.03 0.210±0.17 0.064±0.04 0.066±0.05 0.249±0.09 0.025±0.00 0.712±0.32 0.885±0.58 24.021±9.11
ENSMUSG00000089932 ENSMUST00000161930 N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A 0.858±0.47 0.034±0.00 N/A

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