C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sin3A-associated protein, 30kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164105 SAP30 9606 + 4:173369969-173377532 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296504 SAP30-001 173370943-173377532 protein_coding
  ENST00000504618 SAP30-002 173369969-173371232 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296504
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296504 6.445±0.00 2.199±0.00 0.113±0.00 5.761±1.48 2.061±0.17 6.646±4.25 3.258±2.46 3.396±2.63 3.013±0.69 2.704±0.52 2.066±1.35 5.754±2.66 3.199±0.81 10.804±5.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VG CIL_0008VG_0001 VISTA 4:173198350-173802625
CIL_0008BZ CIL_0008BZ_0001 VISTA 4:173215162-173815719

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0035914 IEA skeletal muscle cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000031609 Sap30 sin3 associated polypeptide protein_coding Mus_musculus

Loading