C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sin3A-associated protein, 30kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296504 SAP30-001 ENSG00000164105 9606 + 4:173370943-173377532 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296504
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296504 6.445±0.00 2.199±0.00 0.113±0.00 5.761±1.48 2.061±0.17 6.646±4.25 3.258±2.46 3.396±2.63 3.013±0.69 2.704±0.52 2.066±1.35 5.754±2.66 3.199±0.81 10.804±5.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VG CIL_0008VG_0001 VISTA 4:173198350-173802625
CIL_0008BZ CIL_0008BZ_0001 VISTA 4:173215162-173815719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000118 IDA histone deacetylase complex
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003714 IDA transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0035914 IEA skeletal muscle cell differentiation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034022 Sap30-001 protein_coding Mus_musculus 0 935
ENSDART00000029763 sap30l-001 protein_coding Danio_rerio 4e-22 110

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