C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family E (OABP), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164163 ABCE1 9606 + 4:145097932-145129179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296577 ABCE1-001 145097932-145129179 protein_coding
  ENST00000502586 ABCE1-004 145098288-145110984 protein_coding
  ENST00000502803 ABCE1-006 145098311-145123305 processed_transcript
  ENST00000504292 ABCE1-005 145108027-145117415 nonsense_mediated_decay
  ENST00000504683 ABCE1-007 145122869-145127643 retained_intron
  ENST00000506506 ABCE1-003 145098314-145123538 processed_transcript
  ENST00000507193 ABCE1-010 145098311-145127573 nonsense_mediated_decay
  ENST00000509593 ABCE1-009 145121034-145123327 retained_intron
  ENST00000510321 ABCE1-002 145121320-145123931 retained_intron
  ENST00000515678 ABCE1-008 145121010-145123690 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296577ENST00000507193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296577 7.006±0.00 11.608±0.00 2.280±0.00 9.075±2.03 8.911±0.84 7.175±0.26 5.462±2.33 6.720±2.17 6.226±1.02 6.926±1.76 7.265±0.00 12.524±3.30 7.457±1.96 12.415±1.26
ENST00000507193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.574±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0001 VISTA 4:144638849-145240129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006401 TAS RNA catabolic process
GO:0008428 TAS ribonuclease inhibitor activity
GO:0009615 TAS response to virus
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016887 IEA ATPase activity
GO:0043086 TAS negative regulation of catalytic activity
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007216 abce1 ATP-binding cassette, sub-family E (OABP), member 1 protein_coding Danio_rerio
ENSMUSG00000058355 Abce1 ATP-binding cassette, sub-family E (OABP), member 1 protein_coding Mus_musculus

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