C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family E (OABP), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296577 ABCE1-001 ENSG00000164163 9606 + 4:145097932-145129179 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296577
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296577 7.006±0.00 11.608±0.00 2.280±0.00 9.075±2.03 8.911±0.84 7.175±0.26 5.462±2.33 6.720±2.17 6.226±1.02 6.926±1.76 7.265±0.00 12.524±3.30 7.457±1.96 12.415±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0001 VISTA 4:144638849-145240129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006200 IEA ATP catabolic process
GO:0006401 TAS RNA catabolic process
GO:0008428 TAS ribonuclease inhibitor activity
GO:0009615 TAS response to virus
GO:0016020 IDA membrane
GO:0016032 IEA viral process
GO:0016887 IEA ATPase activity
GO:0043086 TAS negative regulation of catalytic activity
GO:0051536 IEA iron-sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080536 Abce1-201 protein_coding Mus_musculus 0 2896
ENSMUST00000120629 Gm6640-001 processed_pseudogene Mus_musculus 0 1938

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