C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proline-rich coiled-coil 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164244 PRRC1 9606 + 5:127517609-127555089 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296666 PRRC1-001 127517609-127555089 protein_coding
  ENST00000442138 PRRC1-002 127517651-127552151 protein_coding
  ENST00000507774 PRRC1-006 127517946-127524108 retained_intron
  ENST00000512635 PRRC1-003 127517656-127555081 protein_coding
  ENST00000512871 PRRC1-005 127517640-127524025 retained_intron
  ENST00000513427 PRRC1-008 127547835-127552456 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296666ENST00000442138ENST00000512635ENST00000513427
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296666 5.672±0.00 4.108±0.00 3.972±0.00 2.201±0.46 4.887±0.69 6.427±3.08 2.556±0.13 6.973±0.48 4.674±2.20 6.706±4.09 1.537±0.02 4.856±2.19 4.554±1.17 3.748±2.42
ENST00000442138 N/A N/A 0.355±0.00 N/A 0.992±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.637±0.00
ENST00000512635 6.075±0.00 5.269±0.00 N/A 2.837±0.00 5.856±0.00 4.462±0.00 1.827±0.00 7.387±0.00 5.096±0.00 4.891±0.00 0.652±0.00 7.347±1.54 8.488±2.37 7.064±0.73
ENST00000513427 N/A N/A N/A N/A 6.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H5 CIL_0000H5_0002 CGP 5:127290831-127555089
CIL_0000HB CIL_0000HB_0002 CGP 5:127517609-127658630

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044304 prrc1 proline-rich coiled-coil 1 protein_coding Danio_rerio
ENSMUSG00000024594 Prrc1 proline-rich coiled-coil 1 protein_coding Mus_musculus

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