C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000HB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044304-ENSDARG00000033508 CGP 7955 10:16194107-16221187
GeneTranscriptPositionBiotype
ENSDARG00000033508 (CR396586.1)
Uncharacterized protein
ENSDART00000041585 (CR396586.1-201) 16217569-16221187 protein_coding
ENSDARG00000044304 (prrc1)
proline-rich coiled-coil 1
ENSDART00000065045 (prrc1-001) 16194107-16215265 protein_coding
CIL_0000HB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164244-ENSG00000205279 CGP 9606 5:127517609-127658630
GeneTranscriptPositionBiotype
ENSG00000164244 (PRRC1)
proline-rich coiled-coil 1
ENST00000296666 (PRRC1-001) 127517609-127555089 protein_coding
ENST00000442138 (PRRC1-002) 127517651-127552151 protein_coding
ENST00000507774 (PRRC1-006) 127517946-127524108 retained_intron
ENST00000512635 (PRRC1-003) 127517656-127555081 protein_coding
ENST00000512871 (PRRC1-005) 127517640-127524025 retained_intron
ENST00000513427 (PRRC1-008) 127547835-127552456 processed_transcript
ENSG00000205279 (CTXN3)
cortexin 3
ENST00000379445 (CTXN3-001) 127649044-127658630 protein_coding
ENST00000395322 (CTXN3-002) 127653049-127658630 protein_coding
ENST00000514851 (CTXN3-003) 127653015-127653691 processed_transcript
ENST00000620385 (CTXN3-201) 127657423-127658630 protein_coding
ENSG00000248799 (CTC-548H10.2)
ENST00000512352 (CTC-548H10.2-001) 127651693-127664029 antisense
CIL_0000HB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024594-ENSMUSG00000069372 CGP 10090 18:57354733-57478134
GeneTranscriptPositionBiotype
ENSMUSG00000024594 (Prrc1)
proline-rich coiled-coil 1
ENSMUST00000025490 (Prrc1-201) 57354733-57392719 protein_coding
ENSMUSG00000069372 (Ctxn3)
cortexin 3
ENSMUST00000091892 (Ctxn3-201) 57468486-57478134 protein_coding
ENSMUSG00000086607 (4930511M06Rik)
RIKEN cDNA 4930511M06 gene
ENSMUST00000130696 (4930511M06Rik-004) 57373455-57552201 processed_transcript
ENSMUST00000130724 (4930511M06Rik-005) 57506001-57551776 processed_transcript
ENSMUST00000137603 (4930511M06Rik-002) 57546014-57552395 processed_transcript
ENSMUST00000151209 (4930511M06Rik-001) 57547762-57552397 processed_transcript
ENSMUST00000153884 (4930511M06Rik-003) 57545361-57551879 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HB_0001ENSDARG00000033508ENSDART00000041585ENSDARG00000044304ENSDART00000065045CIL_0000HB_0002ENSG00000164244ENST00000296666ENST00000442138ENST00000507774ENST00000512635ENST00000512871ENST00000513427ENSG00000205279ENST00000379445ENST00000395322ENST00000514851ENST00000620385ENSG00000248799ENST00000512352CIL_0000HB_0003ENSMUSG00000024594ENSMUST00000025490ENSMUSG00000069372ENSMUST00000091892ENSMUSG00000086607ENSMUST00000130696ENSMUST00000130724ENSMUST00000137603ENSMUST00000151209ENSMUST00000153884
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000HB_0001ENSDARG00000033508ENSDART00000041585ENSDARG00000044304ENSDART00000065045CIL_0000HB_0002ENSG00000164244ENST00000296666ENST00000442138ENST00000512635ENST00000513427ENSG00000205279ENST00000379445ENST00000395322ENST00000514851ENST00000620385ENSG00000248799ENST00000512352CIL_0000HB_0003ENSMUSG00000024594ENSMUST00000025490ENSMUSG00000069372ENSMUST00000091892ENSMUSG00000086607ENSMUST00000130696ENSMUST00000137603ENSMUST00000151209ENSMUST00000153884
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033508 ENSDART00000041585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.983±0.00 N/A N/A N/A
ENSDARG00000044304 ENSDART00000065045 N/A N/A N/A 6.508±0.84 N/A N/A 9.252±2.72 10.813±3.08 1.961±0.00 N/A 3.062±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164244 ENST00000296666 5.672±0.00 4.108±0.00 3.972±0.00 2.201±0.46 4.887±0.69 6.427±3.08 2.556±0.13 6.973±0.48 4.674±2.20 6.706±4.09 1.537±0.02 4.856±2.19 4.554±1.17 3.748±2.42
ENST00000442138 N/A N/A 0.355±0.00 N/A 0.992±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.637±0.00
ENST00000507774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512635 6.075±0.00 5.269±0.00 N/A 2.837±0.00 5.856±0.00 4.462±0.00 1.827±0.00 7.387±0.00 5.096±0.00 4.891±0.00 0.652±0.00 7.347±1.54 8.488±2.37 7.064±0.73
ENST00000512871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513427 N/A N/A N/A N/A 6.601±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205279 ENST00000379445 N/A 0.019±0.00 N/A 2.444±0.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.138±0.00
ENST00000395322 N/A N/A 5.204±0.00 N/A 0.111±0.00 N/A N/A 0.355±0.00 N/A N/A N/A 0.018±0.00 N/A 0.053±0.00
ENST00000514851 N/A N/A 2.563±0.00 N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 N/A N/A N/A
ENST00000620385 N/A N/A N/A N/A N/A 0.101±0.00 0.015±0.00 0.137±0.00 N/A N/A 0.204±0.00 N/A N/A 0.044±0.00
ENSG00000248799 ENST00000512352 N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024594 ENSMUST00000025490 14.988±1.86 25.663±10.25 15.995±1.66 9.762±5.68 16.164±7.42 24.195±4.75 7.108±0.41 9.186±0.93 8.660±1.41 17.548±2.87 5.514±0.25 24.121±11.46 8.681±4.58 3.383±0.40
ENSMUSG00000069372 ENSMUST00000091892 0.079±0.04 4.013±1.21 0.057±0.04 0.496±0.31 0.949±0.51 3.934±0.60 0.044±0.00 0.238±0.07 0.007±0.00 1.033±0.96 19.964±2.71 0.230±0.20 0.046±0.02 0.079±0.04
ENSMUSG00000086607 ENSMUST00000130696 N/A N/A N/A N/A N/A N/A N/A N/A 0.118±0.05 0.363±0.00 N/A N/A 0.149±0.00 N/A
ENSMUST00000130724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137603 0.983±0.15 4.013±2.09 0.756±0.07 1.115±0.82 0.412±0.27 1.074±0.26 0.171±0.05 0.471±0.23 0.086±0.06 0.344±0.14 0.377±0.12 1.274±0.51 0.434±0.26 2.550±0.76
ENSMUST00000151209 N/A N/A N/A N/A N/A N/A N/A 0.247±0.08 N/A N/A 0.405±0.05 N/A N/A N/A
ENSMUST00000153884 N/A N/A N/A N/A N/A N/A 0.231±0.00 N/A N/A N/A N/A 0.797±0.00 N/A 16.780±5.63

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