C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PR domain containing 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164256 PRDM9 9606 + 5:23507155-23528597 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296682 PRDM9-001 23507615-23528597 protein_coding
  ENST00000502755 PRDM9-003 23507155-23510027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartPlacentaTestisENST00000296682
Transcript ID Heart Placenta Testis
ENST00000296682 0.010±0.00 0.030±0.02 2.099±0.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005694 IEA chromosome
GO:0006311 IDA meiotic gene conversion
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007283 IEA spermatogenesis
GO:0010844 IEA recombination hotspot binding
GO:0010845 IMP positive regulation of reciprocal meiotic recombination
GO:0016571 IEA histone methylation
GO:0034968 IEA histone lysine methylation
GO:0042800 IEA histone methyltransferase activity (H3-K4 specific)
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0051568 IEA histone H3-K4 methylation
GO:0060903 IEA positive regulation of meiosis I

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000051977 Prdm9 PR domain containing 9 protein_coding Mus_musculus

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