C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BMP binding endothelial regulator
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164619 BMPER 9606 + 7:33904911-34155872 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297161 BMPER-001 33904911-34155872 protein_coding
  ENST00000436222 BMPER-004 33905533-34046313 protein_coding
  ENST00000444773 BMPER-003 33905539-33966561 nonsense_mediated_decay
  ENST00000448280 BMPER-007 33904911-33922028 nonsense_mediated_decay
  ENST00000476525 BMPER-006 34067232-34143360 processed_transcript
  ENST00000494786 BMPER-005 34042676-34055209 processed_transcript
  ENST00000496609 BMPER-002 33905503-33937560 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297161ENST00000436222ENST00000476525ENST00000494786ENST00000496609
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297161 0.519±0.00 5.991±0.00 1.507±0.35 0.436±0.29 0.362±0.28 0.173±0.06 0.804±0.69 0.709±0.44 1.133±0.01 0.331±0.00 0.327±0.27 2.359±0.62 0.376±0.13
ENST00000436222 N/A N/A 7.708±0.00 N/A 0.313±0.00 N/A 2.809±0.00 1.295±0.00 3.023±0.00 0.701±0.00 0.493±0.00 N/A N/A
ENST00000476525 N/A N/A N/A 1.454±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494786 N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A N/A N/A
ENST00000496609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FH CIL_0003FH_0001 CGP 7:33129244-34155872
CIL_0008UM CIL_0008UM_0001 VISTA 7:33758350-34360399
CIL_0003FG CIL_0003FG_0001 CGP 7:33904911-34878332

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001657 IEA ureteric bud development
GO:0002043 IDA blood vessel endothelial cell proliferation involved in sprouting angiogenesis
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005615 IDA extracellular space
GO:0010594 IDA regulation of endothelial cell migration
GO:0030514 TAS negative regulation of BMP signaling pathway
GO:0042118 IDA endothelial cell activation
GO:0048839 IEA inner ear development
GO:0060393 IDA regulation of pathway-restricted SMAD protein phosphorylation
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040893 bmper BMP binding endothelial regulator protein_coding Danio_rerio
ENSMUSG00000031963 Bmper BMP-binding endothelial regulator protein_coding Mus_musculus

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