| Transcript ID | Adipose | Adrenal | Brain | Colon |
|---|---|---|---|---|
| ENST00000373009 | 0.690±0.00 | 1.388±0.00 | 0.539±0.00 | 0.454±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | ubiquitin specific peptidase 49 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000164663  |
USP49 | 9606 | - |
6:41789896-41895361  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000373006 |
USP49-001 | 41797645-41895361 | protein_coding | ||
| ENST00000373009 |
USP49-201 | 41789898-41871637 | protein_coding | ||
| ENST00000373010 |
USP49-002 | 41796498-41887329 | protein_coding | ||
| ENST00000394253 |
USP49-007 | 41789896-41894160 | protein_coding | ||
| ENST00000423567 |
USP49-005 | 41806939-41894455 | protein_coding | ||
| ENST00000448078 |
USP49-004 | 41796677-41805745 | nonsense_mediated_decay | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XI | CIL_0008XI_0001 | VISTA | 6:41187113-41790491 |
| CIL_00093V | CIL_00093V_0001 | VISTA | 6:41255486-41855939 |
| CIL_000963 | CIL_000963_0001 | VISTA | 6:41292979-41894337 |
| CIL_0001ZL | CIL_0001ZL_0001 | CGP | 6:41780349-41790141 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000398 | IMP | mRNA splicing, via spliceosome |
| GO:0004197 | IMP | cysteine-type endopeptidase activity |
| GO:0004221 | IDA | ubiquitin thiolesterase activity |
| GO:0004843 | IDA | ubiquitin-specific protease activity |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0008234 | IEA | cysteine-type peptidase activity |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016579 | IDA | protein deubiquitination |
| GO:0035616 | IDA | histone H2B conserved C-terminal lysine deubiquitination |
| GO:0036459 | IEA | ubiquitinyl hydrolase activity |
| GO:0042393 | IDA | histone binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000000229
|
usp49 | ubiquitin specific peptidase 49 | protein_coding | Danio_rerio | |
|
ENSMUSG00000090115
|
Usp49 | ubiquitin specific peptidase 49 | protein_coding | Mus_musculus | |
