C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ubiquitin specific peptidase 49 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000373010  |
USP49-002 |
ENSG00000164663 |
9606 | - |
6:41796498-41887329  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XI | CIL_0008XI_0001 | VISTA | 6:41187113-41790491 |
| CIL_00093V | CIL_00093V_0001 | VISTA | 6:41255486-41855939 |
| CIL_000963 | CIL_000963_0001 | VISTA | 6:41292979-41894337 |
| CIL_0001ZL | CIL_0001ZL_0001 | CGP | 6:41780349-41790141 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006511 | IEA | ubiquitin-dependent protein catabolic process |
| GO:0008234 | IEA | cysteine-type peptidase activity |
| GO:0008270 | IEA | zinc ion binding |
| GO:0036459 | IEA | ubiquitinyl hydrolase activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000024779
|
Usp49-001 | protein_coding | Mus_musculus | 0 | 2191 |
|
ENSMUST00000132397
|
Gm20517-001 | nonsense_mediated_decay | Mus_musculus | 0 | 2145 |
|
ENSMUST00000152724
|
Usp49-002 | protein_coding | Mus_musculus | 0 | 1587 |
|
ENSMUST00000131550
|
Usp49-004 | nonsense_mediated_decay | Mus_musculus | 0 | 263 |
|
ENSMUST00000145314
|
Usp49-003 | protein_coding | Mus_musculus | 0 | 222 |
