C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sad1 and UNC84 domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164744 SUN3 9606 - 7:47987148-48029119 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297325 SUN3-002 47987148-48029098 protein_coding
  ENST00000395572 SUN3-003 47987153-48029119 protein_coding
  ENST00000412142 SUN3-201 47987151-48029119 protein_coding
  ENST00000412371 SUN3-008 47987151-48006011 protein_coding
  ENST00000438771 SUN3-009 47987330-48009063 protein_coding
  ENST00000449896 SUN3-004 47987156-48029048 nonsense_mediated_decay
  ENST00000453071 SUN3-005 47987148-48017308 protein_coding
  ENST00000453192 SUN3-202 47987330-48009063 protein_coding
  ENST00000461953 SUN3-007 47987148-47988963 retained_intron
  ENST00000473723 SUN3-006 47987148-48000181 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297325ENST00000395572ENST00000412142ENST00000412371ENST00000438771ENST00000449896ENST00000453192ENST00000461953ENST00000473723
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.564±4.09
ENST00000395572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.306±1.69
ENST00000412142 0.076±0.00 0.223±0.00 0.102±0.00 0.125±0.00 0.023±0.00 0.071±0.00 0.110±0.00 0.075±0.00 0.054±0.00 0.060±0.00 0.060±0.00 N/A N/A
ENST00000412371 N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 N/A
ENST00000438771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.01 N/A 14.092±0.00
ENST00000449896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 3.444±0.00
ENST00000453192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A
ENST00000461953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A
ENST00000473723 N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.15 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SA CIL_0000SA_0001 CGP 7:47987148-48061304

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral component of membrane
GO:0034993 IEA SUN-KASH complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000040985 Sun3 Sad1 and UNC84 domain containing 3 protein_coding Mus_musculus

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