C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000SA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000164744-ENSG00000164746 CGP 9606 7:47987148-48061304
GeneTranscriptPositionBiotype
ENSG00000164744 (SUN3)
Sad1 and UNC84 domain containing 3 		ENST00000297325 (SUN3-002) 47987148-48029098 protein_coding
ENST00000395572 (SUN3-003) 47987153-48029119 protein_coding
ENST00000412142 (SUN3-201) 47987151-48029119 protein_coding
ENST00000412371 (SUN3-008) 47987151-48006011 protein_coding
ENST00000438771 (SUN3-009) 47987330-48009063 protein_coding
ENST00000449896 (SUN3-004) 47987156-48029048 nonsense_mediated_decay
ENST00000453071 (SUN3-005) 47987148-48017308 protein_coding
ENST00000453192 (SUN3-202) 47987330-48009063 protein_coding
ENST00000461953 (SUN3-007) 47987148-47988963 retained_intron
ENST00000473723 (SUN3-006) 47987148-48000181 processed_transcript
ENSG00000164746 (C7orf57)
chromosome 7 open reading frame 57 		ENST00000348904 (C7orf57-001) 48035520-48061297 protein_coding
ENST00000420324 (C7orf57-004) 48035511-48061253 protein_coding
ENST00000430738 (C7orf57-003) 48035511-48061304 protein_coding
ENST00000435376 (C7orf57-002) 48035511-48061304 protein_coding
ENST00000461741 (C7orf57-005) 48035530-48041653 retained_intron
ENST00000539619 (C7orf57-201) 48035511-48061294 protein_coding
CIL_0000SA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040985-ENSMUSG00000040978 CGP 10090 11:9016054-9069356
GeneTranscriptPositionBiotype
ENSMUSG00000040978 (Gm11992)
predicted gene 11992 		ENSMUST00000043285 (Gm11992-001) 9048594-9069356 protein_coding
ENSMUSG00000040985 (Sun3)
Sad1 and UNC84 domain containing 3 		ENSMUST00000043377 (Sun3-002) 9016054-9039589 protein_coding
ENSMUST00000102909 (Sun3-001) 9016054-9048991 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SA_0001ENSG00000164744ENST00000297325ENST00000395572ENST00000412142ENST00000412371ENST00000438771ENST00000449896ENST00000453071ENST00000453192ENST00000461953ENST00000473723ENSG00000164746ENST00000348904ENST00000420324ENST00000430738ENST00000435376ENST00000461741ENST00000539619CIL_0000SA_0002ENSMUSG00000040978ENSMUST00000043285ENSMUSG00000040985ENSMUST00000043377ENSMUST00000102909
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SA_0001ENSG00000164744ENST00000297325ENST00000395572ENST00000412142ENST00000412371ENST00000438771ENST00000449896ENST00000453192ENST00000461953ENST00000473723ENSG00000164746ENST00000348904ENST00000420324ENST00000430738ENST00000435376ENST00000461741ENST00000539619CIL_0000SA_0002ENSMUSG00000040978ENSMUST00000043285ENSMUSG00000040985ENSMUST00000043377
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164744 ENST00000297325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.564±4.09
ENST00000395572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.306±1.69
ENST00000412142 0.076±0.00 0.223±0.00 N/A 0.102±0.00 0.125±0.00 0.023±0.00 0.071±0.00 0.110±0.00 0.075±0.00 0.054±0.00 0.060±0.00 0.060±0.00 N/A N/A
ENST00000412371 N/A N/A N/A 0.350±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 N/A
ENST00000438771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.01 N/A 14.092±0.00
ENST00000449896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 3.444±0.00
ENST00000453071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A
ENST00000461953 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A
ENST00000473723 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.15 N/A
ENSG00000164746 ENST00000348904 N/A N/A N/A 0.151±0.00 0.004±0.00 N/A N/A N/A N/A 0.692±0.00 N/A 0.226±0.00 N/A 0.811±0.35
ENST00000420324 N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A 0.751±0.00 N/A 0.159±0.06 0.036±0.02 1.430±0.00
ENST00000430738 N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A 0.209±0.00 N/A N/A N/A N/A
ENST00000435376 N/A 0.014±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A N/A
ENST00000461741 N/A N/A N/A 0.334±0.00 N/A N/A N/A N/A N/A N/A N/A 0.451±0.00 N/A N/A
ENST00000539619 N/A 0.021±0.00 N/A 0.035±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 1.236±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040978 ENSMUST00000043285 0.346±0.17 0.469±0.08 0.302±0.10 0.366±0.05 0.614±0.31 0.930±0.25 0.419±0.19 14.710±2.93 0.516±0.44 3.901±0.26 0.020±0.01 3.953±1.89 0.877±0.24 28.555±11.13
ENSMUSG00000040985 ENSMUST00000043377 N/A N/A N/A N/A N/A N/A 0.153±0.06 N/A 0.016±0.00 N/A 0.018±0.00 N/A N/A 36.480±13.46
ENSMUST00000102909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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